| Sequence 1: | NP_000950.1 | Gene: | PTGFR / 5737 | HGNCID: | 9600 | Length: | 359 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_503291.3 | Gene: | srx-21 / 185166 | WormBaseID: | WBGene00005912 | Length: | 294 | Species: | Caenorhabditis elegans |
| Alignment Length: | 296 | Identity: | 60/296 - (20%) |
|---|---|---|---|
| Similarity: | 110/296 - (37%) | Gaps: | 46/296 - (15%) |
- Green bases have known domain annotations that are detailed below.
|
Human 29 SVFFSVIFMTVGILSNSLAIAILMKAYQRFRQKSKASFLLLASGLVITDFFGHLINGAIAVFVYA 93
Human 94 SDKEWIRFDQSNVLCSIFGICMVFSGLCPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSG 158
Human 159 VCLFAVFIALL--PILGHRDYKIQASRTWCFYNTEDIK--DWEDRFYL--------LLFSFLGLL 211
Human 212 ALGV---SLLCNAITGIT--LLRVK--FKSQQHRQGRS-------HHL-------EMVIQLLAIM 255
Human 256 CVSCICWSPFLVTMANIGIN-GNHSLETCETTLFAL 290 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| PTGFR | NP_000950.1 | 7tmA_FP | 27..316 | CDD:320273 | 60/296 (20%) |
| TM helix 1 | 28..54 | CDD:320273 | 8/24 (33%) | ||
| TM helix 2 | 66..92 | CDD:320273 | 3/25 (12%) | ||
| TM helix 3 | 108..138 | CDD:320273 | 4/29 (14%) | ||
| TM helix 4 | 150..172 | CDD:320273 | 6/23 (26%) | ||
| TM helix 5 | 197..226 | CDD:320273 | 9/39 (23%) | ||
| TM helix 6 | 242..272 | CDD:320273 | 5/43 (12%) | ||
| TM helix 7 | 283..308 | CDD:320273 | 2/8 (25%) | ||
| srx-21 | NP_503291.3 | TM helix 1 | 8..32 | CDD:341315 | 9/29 (31%) |
| 7TM_GPCR_Srx | 12..272 | CDD:370981 | 55/271 (20%) | ||
| TM helix 2 | 39..65 | CDD:341315 | 4/30 (13%) | ||
| TM helix 3 | 77..106 | CDD:341315 | 4/28 (14%) | ||
| TM helix 4 | 119..138 | CDD:341315 | 5/18 (28%) | ||
| TM helix 5 | 164..188 | CDD:341315 | 5/23 (22%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D412827at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.010 | |||||