DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTGER3 and ptger3

DIOPT Version :9

Sequence 1:NP_942011.1 Gene:PTGER3 / 5733 HGNCID:9595 Length:418 Species:Homo sapiens
Sequence 2:XP_017212135.1 Gene:ptger3 / 100000544 ZFINID:ZDB-GENE-120508-5 Length:401 Species:Danio rerio


Alignment Length:383 Identity:222/383 - (57%)
Similarity:275/383 - (71%) Gaps:21/383 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    41 PGSGEDCGSVSVAFPITMLLTGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLL 105
            ||....||||||.|||||::||.|||:||||||..:||::|:|||:|||||||.||||||.||||
Zfish    33 PGRSAGCGSVSVFFPITMMVTGMVGNSLAMLLVYSAYRKKENKRKRSFLLCIGSLALTDLFGQLL 97

Human   106 TTPVVIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMK 170
            |:|:||.||.:..:|:.:|||..||.|||:.||.|||..||:|||||:||||||.|||||:.:||
Zfish    98 TSPIVISVYRADMKWDRVDPSKTLCAFFGVCMTTFGLCPLFLASAMAIERALAIIAPHWYSHYMK 162

Human   171 TRATRAVLLGVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFA 235
            |..|:.||:.:|..||.|||||:.|||:||:|||||||||:||       .....||.|||:.||
Zfish   163 TSVTKQVLVIIWCLVLLFALLPIAGVGEYTLQWPGTWCFINTG-------DKDVTGNTFFATTFA 220

Human   236 FLGLLALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI 300
            .||:.:|.||.|||:.||:|||:||:.|::::|||.||.|:||||.||||||||||..||||||:
Zfish   221 ALGIFSLLVTLSCNVVTIRALVTRCKTKSSSTQSSKQWERLTTETVIQLMGIMCVLLTCWSPLLV 285

Human   301 MMLKMIFNQTSVEHC-----KTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQM 360
            :|||||...||..||     .:..|.||:|||||.|:||||||||||||||||||:||||||||:
Zfish   286 LMLKMILTHTSSHHCYSAGSLSPQELQKDCNFFLTAIRLASLNQILDPWVYLLLREILLRKFCQV 350

Human   361 RKRRLREQLICSLQNSQIQRATAHCGQVQTYRVLNREEMEVLVSSINVYTRISTVKTE 418
            .....:    |||   .:|:.|.....||..:.:..:  :|...|:||...|..|..|
Zfish   351 ASAVSK----CSL---DVQKQTQCPLDVQNKKAIQND--DVHKQSLNVENSILNVGCE 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTGER3NP_942011.1 7tm_1 65..346 CDD:278431 178/285 (62%)
ptger3XP_017212135.1 7tm_4 48..>238 CDD:304433 120/196 (61%)
7tm_1 57..336 CDD:278431 178/285 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194327282
Domainoid 1 1.000 352 1.000 Domainoid score I5806
eggNOG 1 0.900 - - E33208_3BDS8
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H105703
Inparanoid 1 1.050 428 1.000 Inparanoid score I7511
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG40300
OrthoDB 1 1.010 - - D291739at7742
OrthoFinder 1 1.000 - - FOG0011267
OrthoInspector 1 1.000 - - oto50280
orthoMCL 1 0.900 - - OOG6_117024
Panther 1 1.100 - - LDO PTHR11866
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X8878
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1717.270

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