DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTGER2 and npr-5

DIOPT Version :9

Sequence 1:NP_000947.2 Gene:PTGER2 / 5732 HGNCID:9594 Length:358 Species:Homo sapiens
Sequence 2:NP_001024265.1 Gene:npr-5 / 190386 WormBaseID:WBGene00021983 Length:433 Species:Caenorhabditis elegans


Alignment Length:316 Identity:72/316 - (22%)
Similarity:133/316 - (42%) Gaps:65/316 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    31 MFSAGVLGNLIALALLARRWRGDVGCSAGRRSSL-SLFHVLVTELVFTDLLGTCLISPV-----V 89
            :|..|:.||            |.|..:..|...| |..:|.:..|:||||:......||     :
 Worm    65 LFVLGIFGN------------GGVLWAVARNKRLQSARNVFLLNLIFTDLILVFTAIPVTPWYAM 117

Human    90 LASYARNQTLVALAPESRACTYFAFAMTFFSLATMLMLFAMALERYLSIGHPYFYQRRVSRSGGL 154
            ...:|....:..|.|.|.:|:.|   :|.:||.      |::|:::|.|..|  .::.||....|
 Worm   118 TKDWAFGSVMCHLVPLSNSCSVF---VTSWSLT------AISLDKFLHINDP--TKQPVSIRQAL 171

Human   155 AVLPVIYAVSLLFCSLPLLDYGQYVQYCPGTWCFIRHGRTAYL---------------QLYATLL 204
            |:..:|:.||.|. :||.|...::|.   |:: :::.|.|.|.               ::|.|.:
 Worm   172 AITFLIWIVSTLI-NLPYLMSFEHVD---GSF-YVQPGETPYCGHFCDEANWQSENSRKIYGTTV 231

Human   205 LLL-----IVSVLACNFSVILNLIRMHRRSRRSRCGPSLGSGRGGPGARRRGERVSMAEETDHLI 264
            :||     :..:..|.|. ||..:......:.::...||..       ::|.:..|..::.::::
 Worm   232 MLLQFVVPMAVITYCYFK-ILQKVSKDMIIQNAQFCQSLTQ-------KQRSDATSRKKKVNYIL 288

Human   265 LLAIMTITFAVCSLPFTIFAYMNETSSRKEKWDLQALRFLSINSIIDPWVFAILRP 320
            :  .|.:||..|.||.|:...:.:.....| |..:...|.:||:.:......:..|
 Worm   289 I--AMVVTFIGCWLPLTLLNLVKDFKKEPE-WLKRQPFFWAINAHVIAMSLVVWNP 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTGER2NP_000947.2 7tm_1 38..314 CDD:278431 69/301 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..253 3/21 (14%)
npr-5NP_001024265.1 7tmA_NPYR-like 56..347 CDD:320331 72/316 (23%)
TM helix 1 58..82 CDD:320331 6/28 (21%)
TM helix 2 91..113 CDD:320331 8/21 (38%)
TM helix 3 129..151 CDD:320331 9/30 (30%)
TM helix 4 172..188 CDD:320331 6/16 (38%)
TM helix 5 225..248 CDD:320331 5/22 (23%)
TM helix 6 282..307 CDD:320331 7/26 (27%)
TM helix 7 323..347 CDD:320331 4/19 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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