| Sequence 1: | NP_000944.1 | Gene: | PTGDR / 5729 | HGNCID: | 9591 | Length: | 359 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_503293.3 | Gene: | srx-23 / 185164 | WormBaseID: | WBGene00005914 | Length: | 294 | Species: | Caenorhabditis elegans |
| Alignment Length: | 307 | Identity: | 62/307 - (20%) |
|---|---|---|---|
| Similarity: | 113/307 - (36%) | Gaps: | 71/307 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Human 68 LTVTDLLGKCLLSPVVLAA----YAQNRSLRVLAP--ALDN-SLCQAFAFFM------------- 112
Human 113 --SFFGLS-------STLQLLAMALECWLSLGHPFFYRRHITL----------RLGALVAPVVSA 158
Human 159 FSLAFCALPFMGFGKFVQYCPGTWCFIQMVHEEGSLSVLGYS-VLYSSLMALLVLATVLCNLGAM 222
Human 223 RNLYAMHRRL------QRHPRSCTRDCA---EPRADGREASPQPLEELDHLLLLALMTVLFTMCS 278
Human 279 LPVIYRAYYGAFKDVKEKNRTSEEAEDLRALRFLSVISIVDPWIFII 325 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| PTGDR | NP_000944.1 | 7tmA_PGD2 | 17..335 | CDD:320268 | 62/307 (20%) |
| TM helix 1 | 18..44 | CDD:320268 | |||
| TM helix 2 | 61..87 | CDD:320268 | 8/22 (36%) | ||
| TM helix 3 | 105..135 | CDD:320268 | 8/51 (16%) | ||
| TM helix 4 | 147..169 | CDD:320268 | 5/21 (24%) | ||
| TM helix 5 | 195..224 | CDD:320268 | 10/29 (34%) | ||
| TM helix 6 | 258..288 | CDD:320268 | 6/29 (21%) | ||
| TM helix 7 | 302..327 | CDD:320268 | 4/24 (17%) | ||
| srx-23 | NP_503293.3 | TM helix 1 | 9..32 | CDD:341315 | 8/21 (38%) |
| 7TM_GPCR_Srx | 12..272 | CDD:370981 | 57/273 (21%) | ||
| TM helix 2 | 39..65 | CDD:341315 | 3/25 (12%) | ||
| TM helix 3 | 76..106 | CDD:341315 | 7/32 (22%) | ||
| TM helix 4 | 119..139 | CDD:341315 | 5/26 (19%) | ||
| TM helix 5 | 169..190 | CDD:341315 | 8/23 (35%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D412827at33208 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.010 | |||||