DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACTR3B and Act42A

DIOPT Version :9

Sequence 1:NP_065178.1 Gene:ACTR3B / 57180 HGNCID:17256 Length:418 Species:Homo sapiens
Sequence 2:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster


Alignment Length:417 Identity:152/417 - (36%)
Similarity:225/417 - (53%) Gaps:61/417 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRR-VLRGVDDLDFFIGDEAIDKPTY 72
            |||.|:|..|.|:||:..|:.:.||         :|.:.:.: |:.|:...|.::||||..|...
  Fly    10 VVDNGSGMCKAGFAGDDAPRAVFPS---------IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65

Human    73 AT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNV 136
            .| |:||.|||:.:||.||:......:..||..||:|..|:||.|||...|||.:.:||||:||.
  Fly    66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130

Human   137 PGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201
            |.:|:|:||||:|.||       .|| ||||:||||||:|.:|:.|||.:...|..:.:||||:|
  Fly   131 PAMYVAIQAVLSLYAS-------GRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187

Human   202 YFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDPRKWIKQYTGINAINQKK 266
            .::.::|.||..........|..:.||||.||:..|..:|.|             |..::.:.:|
  Fly   188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA-------------TAASSSSLEK 239

Human   267 F-------VIDVGYERFLGPEIFFHPEFANPDFMES--ISDVVDEVIQNCPIDVRRPLYKNVVLS 322
            .       ||.:|.|||..||..|.|.|..   ||:  |.:.....|..|.:|:|:.||.|.|||
  Fly   240 SYELPDGQVITIGNERFRCPESLFQPSFLG---MEACGIHETTYNSIMKCDVDIRKDLYANTVLS 301

Human   323 GGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAVWFGGSMLAST 387
            ||:||:.....|:|:::.                .:.|..:::::|....::|:||.|||:|||.
  Fly   302 GGTTMYPGIADRMQKEIT----------------ALAPSTMKIKIVAPPERKYSVWIGGSILASL 350

Human   388 PEFFQVCHTKKDYEEYGPSICRHNPVF 414
            ..|.|:..:|::|:|.||||. |...|
  Fly   351 STFQQMWISKQEYDESGPSIV-HRKCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTR3BNP_065178.1 PTZ00280 2..417 CDD:240343 152/417 (36%)
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 151/415 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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