DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTR3B and Arp2

DIOPT Version :9

Sequence 1:NP_065178.1 Gene:ACTR3B / 57180 HGNCID:17256 Length:418 Species:Homo sapiens
Sequence 2:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster


Alignment Length:405 Identity:139/405 - (34%)
Similarity:211/405 - (52%) Gaps:36/405 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     9 VVDCGTGYTKLGYAGNTEPQFIIPSCIA---IRESAKVVDQAQRRVLRGVDDLDFFIGDEAID-K 69
            |.|.|||:.|.||||:..|..|.||.:.   ||...|:.|...:.:  .||||  .:||||.. :
  Fly    10 VCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDL--HVDDL--MVGDEASQLR 70

Human    70 PTYATKWPIRHGIIEDWDLMERFMEQVVF-KYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFES 133
            ......:|:.:|::.:||.|....:.... |.:..:|.:...|:||||:|..:|||.:.|:|||.
  Fly    71 SLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEK 135

Human   134 FNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGR 198
            :.....|||:||||.|.|        :..::|:||||||||||:.||.|.:.:....:.:.||||
  Fly   136 YGFDSAYIAIQAVLTLYA--------QGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGR 192

Human   199 DITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDPRKWIKQYTGINAIN 263
            |||.::.:||..|..........||.:.:|||.|||..||..| .:..::....::.||..:.  
  Fly   193 DITRYLIKLLLLRGYAFNHSADFETVRIMKEKLCYIGYDIEME-QRLALETTVLVESYTLPDG-- 254

Human   264 QKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMF 328
               .||.||.|||..||..|.|...|.: ...|:::....||...||:|..|||::||||||||:
  Fly   255 ---RVIKVGGERFEAPEALFQPHLINVE-GPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMY 315

Human   329 RDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPE---- 389
            .....||:|::|     :|.|...|.....|....::::.....::..|:.||::||...:    
  Fly   316 PGLPSRLEREIK-----QLYLERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDG 375

Human   390 FFQVCHTKKDYEEYG 404
            |:.   :|::|:|.|
  Fly   376 FWM---SKQEYQEQG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTR3BNP_065178.1 PTZ00280 2..417 CDD:240343 139/405 (34%)
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 139/405 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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