DRSC/TRiP Functional Genomics Resources

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Protein Alignment rps6ka2 and S6k

DIOPT Version :9

Sequence 1:XP_699952.2 Gene:rps6ka2 / 571285 ZFINID:ZDB-GENE-090827-1 Length:733 Species:Danio rerio
Sequence 2:NP_001261450.1 Gene:S6k / 38654 FlyBaseID:FBgn0283472 Length:490 Species:Drosophila melanogaster


Alignment Length:381 Identity:183/381 - (48%)
Similarity:247/381 - (64%) Gaps:18/381 - (4%)


- Green bases have known domain annotations that are detailed below.


Zfish    21 KSRSKSSSLCKLEDDSILKEFDISHH---------------VKEGFEKADPSQFELLKVLGQGSY 70
            |:|.......:|:|..:..|..|:.|               |..|..|..|..|||.||||:|.|
  Fly    24 KARDSDDDRIELDDVDLEPELCINLHQDTEGQETIQLCEENVNPGKIKLGPKDFELKKVLGKGGY 88

Zfish    71 GKVFLVRKIKGSDTGQLYAMKVLKKATL--KVRDRVRSKMERDILAEVNHPFIVKLHYAFQTEGK 133
            ||||.|||..|.|..:.:||||||||::  ..:|...::.||:||..|.|||||:|.|||||:||
  Fly    89 GKVFQVRKTAGRDANKYFAMKVLKKASIVTNQKDTAHTRAERNILEAVKHPFIVELVYAFQTDGK 153

Zfish   134 LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHI 198
            |||||::|.||:||..|.:|.:|.|:...|||:|:.|||.|||.||||||||||||||||.:||:
  Fly   154 LYLILEYLSGGELFMHLEREGIFLEDTTCFYLSEIILALGHLHKLGIIYRDLKPENILLDAQGHV 218

Zfish   199 KITDFGLSKEAIDHDKRAYSFCGTIEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD 263
            |:|||||.||.|......::|||||||||||::.|.||.::.||||.|.|||:||||..||..::
  Fly   219 KLTDFGLCKEHIQEGIVTHTFCGTIEYMAPEILTRSGHGKAVDWWSLGALMFDMLTGVPPFTAEN 283

Zfish   264 RKETMALILKAKLGMPQFLSPEVQSLLRALFKRNPSNRLGAGPDGVEEIKRHIFFATIDWNKLYR 328
            ||:|:..||||||.:|.:|:||.:.|:|.|.||....|||:||:....::.|.||..::|:.:..
  Fly   284 RKKTIETILKAKLNLPAYLTPEARDLVRRLMKRQEPQRLGSGPEDAAAVQIHPFFKHVNWDDVLA 348

Zfish   329 REIKPPFKPAVGRPEDTFHFDPEFTSRTPTDSP-GVPASANAHQLFRGFSFVATNL 383
            |.::||.||.:...:|...||..||.:.|.||| ....|.:|:.:|:||::||.::
  Fly   349 RRLEPPIKPLLRSEDDVSQFDTRFTRQIPVDSPDDTTLSESANLIFQGFTYVAPSI 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rps6ka2XP_699952.2 S_TKc 59..318 CDD:214567 148/260 (57%)
STKc_RSK_N 63..379 CDD:270734 167/318 (53%)
PKc_like 411..703 CDD:304357
Pkinase 415..672 CDD:278497
S6kNP_001261450.1 PTZ00263 76..397 CDD:140289 168/320 (53%)
STKc_p70S6K 81..402 CDD:270736 168/320 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573236
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1132245at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R469
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.880

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