DRSC/TRiP Functional Genomics Resources

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Protein Alignment NUP107 and NUP84

DIOPT Version :10

Sequence 1:NP_065134.1 Gene:NUP107 / 57122 HGNCID:29914 Length:925 Species:Homo sapiens
Sequence 2:NP_010167.1 Gene:NUP84 / 851441 SGDID:S000002274 Length:726 Species:Saccharomyces cerevisiae


Alignment Length:808 Identity:168/808 - (20%)
Similarity:328/808 - (40%) Gaps:150/808 - (18%)


- Green bases have known domain annotations that are detailed below.


Human   155 FSDFLQSFL-----KHSSSTVFDLVEEYENIC----------GSQVNILSKIVSRATPGLQKFSK 204
            |||.|:.|.     :.:....|:::.|:.:..          |.:.|::|               
Yeast    15 FSDTLKEFKIEQNNEQNPIDPFNIIREFRSAAGQLALDLANSGDESNVIS--------------- 64

Human   205 TASMLWLLQQEMVTWRL--LASLYRDRIQSALEEESVFAVTAVNASEKTVVEALFQRDSLVRQSQ 267
              |..|.|:...  |.|  |..::|: ....|:|..:....:....||    .|.|.:..:.|..
Yeast    65 --SKDWELEARF--WHLVELLLVFRN-ADLDLDEMELHPYNSRGLFEK----KLMQDNKQLYQIW 120

Human   268 LVVDWLESIAKDEIGEFSDNIEFYAKSVYWENTLHTLKQRQLTSYVGSVRPLVTELDPDAPIRQK 332
            :|:.||:.  ...:.|...|:    .:..|.|:        :||  |.::    ..|.|.|:|:.
Yeast   121 IVMVWLKE--NTYVMERPKNV----PTSKWLNS--------ITS--GGLK----SCDLDFPLREN 165

Human   333 M-PLDDLDREDEVRLLKYLFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLYHDPNVNG--GTE 394
            . .||..|:|::....||::.||.||..:||....|..........|.|.:.|.:|.::.  ..|
Yeast   166 TNVLDVKDKEEDHIFFKYIYELILAGAIDEALEEAKLSDNISICMILCGIQEYLNPVIDTQIANE 230

Human   395 LEPVEGNPYRRIWKISCWRMAEDELFNRYERAIYAALSGNL--KQLLPVCDTWEDTVWAYFRVMV 457
            ....:|.....:|:.:.:.:::....:.||||||:.|||.:  :::|...| ||..:..:...::
Yeast   231 FNTQQGIKKHSLWRRTVYSLSQQAGLDPYERAIYSYLSGAIPNQEVLQYSD-WESDLHIHLNQIL 294

Human   458 DSLVEQEI--QTSVATLDETEELPREYLGANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLI 520
            .:.:|..:  ...|.|.:....||...|    |:::|...:.:    |...|::....::...:|
Yeast   295 QTEIENYLLENNQVGTDELILPLPSHAL----TVQEVLNRVAS----RHPSESEHPIRVLMASVI 351

Human   521 LGDIDGLMDEFSKWL------SKSRNNL--PGHLLRFMTHLILFFRTLGLQTKEEV-SIEVLKTY 576
            |..:..::....:.|      :::.|::  ..:|||.:|||.:....:...:.||| ..:::.||
Yeast   352 LDSLPSVIHSSVEMLLDVVKGTEASNDIIDKPYLLRIVTHLAICLDIINPGSVEEVDKSKLITTY 416

Human   577 IQLLIREKHTNLIAFYTCHLPQDLAVAQYALFLESVTEFEQRHHCLELAKEADLDVATITKTVVE 641
            |.||..:.....|..|...|.:...:...:..|.|:.:.:.|...:|......|..:.|.:...:
Yeast   417 ISLLKLQGLYENIPIYATFLNESDCLEACSFILSSLEDPQVRKKQIETINFLRLPASNILRRTTQ 481

Human   642 NIRKKDNGEFS-HHDLAPALDTGTTEEDRLKIDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKH 705
            .:..:...|:| .::::.:.|....  |...|..::||: :.....:|:....|:.|:||.:.:.
Yeast   482 RVFDETEQEYSPSNEISISFDVNNI--DMHLIYGVEWLI-EGKLYVDAVHSIIALSRRFLLNGRV 543

Human   706 EAAKEVFVKIPQDSIAEIYNQCEEQGMESPLPAEDDNAIR--------EHLC--IRAYLEAHETF 760
            :|.::.   :.:::|.||....|.:.:...: ::|:|..:        |||.  ||.|       
Yeast   544 KALEQF---MERNNIGEICKNYELEKIADNI-SKDENEDQFLEEITQYEHLIKGIREY------- 597

Human   761 NEWFKHMNSVPQKPALIPQPTFTEKVAHEHKEKKYEMDFGIWKGHLDALTADVKEKMYNVLLFVD 825
            .||.|.::.:..:..:   ||..||:....|:     .|.:.|..|..||:.         .|.|
Yeast   598 EEWQKSVSLLSSESNI---PTLIEKLQGFSKD-----TFELIKTFLVDLTSS---------NFAD 645

Human   826 GGWMVDVREDAKEDHERTHQMVLLRKLCLPMLCFLLHTILHSTGQ-------YQECLQLADMVSS 883
            ..           |:|..::   :|.|..|.|...||..|....:       ..|.|....:|::
Yeast   646 SA-----------DYEILYE---IRALYTPFLLMELHKKLVEAAKLLKIPKFISEALAFTSLVAN 696

Human   884 ERHKLYLVF-SKEELRKLLQKLRESSLM 910
            |..|:||:| |..:|::.|..:..::.:
Yeast   697 ENDKIYLLFQSSGKLKEYLDLVARTATL 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NUP107NP_065134.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..66
Nup84_Nup100 209..908 CDD:461184 157/735 (21%)
NUP84NP_010167.1 Nup84_Nup100 66..722 CDD:461184 157/736 (21%)
Blue background indicates that the domain is not in the aligned region.

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