DRSC/TRiP Functional Genomics Resources

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Protein Alignment NUP107 and npp-5

DIOPT Version :10

Sequence 1:NP_065134.1 Gene:NUP107 / 57122 HGNCID:29914 Length:925 Species:Homo sapiens
Sequence 2:NP_496481.1 Gene:npp-5 / 174779 WormBaseID:WBGene00003791 Length:813 Species:Caenorhabditis elegans


Alignment Length:871 Identity:176/871 - (20%)
Similarity:312/871 - (35%) Gaps:253/871 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   103 TNLDDSNW----AAAF------SSQRSGLFTNTEPHSITEDVTISAVMLREDDPGEAASMSMFSD 157
            |||.:..:    |.||      ..|.|.|.. |..|.|..:|.:....|.......|:|....::
 Worm    38 TNLSEKLYHELCALAFGEFDIPQGQISPLMW-TRLHEIYSEVEMQTRKLPAGSNYSASSQKYANE 101

Human   158 FLQSFLKHSSSTVFDLVEEYENICGSQVNILSKIVSRATPGLQKFSKT-ASMLWLLQQEMVTWRL 221
            .:|  :....|....|..||:...  :|::|||:|....    :|.:. |.:||           
 Worm   102 AVQ--IASVLSIYTALAHEYDETV--EVSLLSKLVVEDV----EFRRIYALLLW----------- 147

Human   222 LASLYRDRIQSALEEESVFAVTAVNASEKTVVEALFQR--DSLVRQSQLVVDWLESIAKDEIGEF 284
                                      |||.:.|..:::  ...||:       ||.|....|   
 Worm   148 --------------------------SEKAISEQQYEKGLGDKVRK-------LEGIKSSRI--- 176

Human   285 SDNIEFYAKSVYWENTLHTLKQRQLTSYVGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKY 349
                          |::..||:   .::..:..|....||||||..::      |:..|...:..
 Worm   177 --------------NSMMALKR---PTFGAANAPKDASLDPDAPGTKE------DQALEQMAMNV 218

Human   350 LFTLIRAGMTEEAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELE-PVEGN-----PYRRIWK 408
            .|.|||:|.|.:|..|....|.....|.|:...:..:|       |: |:|.:     .|:|..:
 Worm   219 FFQLIRSGETSKAANLAIDLGMGAIGAQLQLHSMLRNP-------LDIPLEASKQNFGEYKRSRR 276

Human   409 ISCWRM----------AEDELFNRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQ 463
            ...::|          :||:.:    ..:.:|:.||::.:|....:..:.||||    .:|.|..
 Worm   277 AKYYQMTQKLIEQSQGSEDDAY----WMLISAIRGNIQPMLKAGKSVIEKVWAY----ANSAVLA 333

Human   464 EIQTSVATLDETEELPREYLGANWTLEKVFEELQA-TDKKRVLEENQEHYHIVQKFLILGDIDGL 527
            .|..:...:  |:|..........|.:.:.:||:: .|:.:            :.:::|..||.:
 Worm   334 RILAAEGAM--TQETISTLFNVPLTSKSILDELRSEADRTK------------EVYILLRVIDDM 384

Human   528 MDEFSKWLSKSRNNLPGHL-------------LRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQL 579
            :::..:.|.|..|...|..             |....||:......|.:..::.:..::..:..|
 Worm   385 LNDDIEDLYKFANETVGEFVPNDKNCQVNMLALDIFFHLVAVSYASGFEPNDDGNAVIILGFDDL 449

Human   580 LIR---EKHTNLIAFYTCHLPQDLAVAQYALFLESVTEFEQRHHCLELAKEADLDVATITKTVVE 641
            ..|   ..|..:.|||:..||:|:.:.:....:::|...|:|....|..|::|:|......|::|
 Worm   450 RARSGTSSHKKMAAFYSRFLPEDMKLPEIVETMKAVDSDEEREILAESLKQSDIDFGRCACTLIE 514

Human   642 NIRKKDNGEFSHHDLAPALDTGTTEEDRLKIDVIDWLVFDPAQRA-EALKQGNAIMRKFLASKKH 705
            .|||.|..:           ..|.||   :||...||:....:.| .||::.|.::||.:.|...
 Worm   515 QIRKDDKTK-----------VVTLEE---QIDHWHWLLIGGEETALAALEECNRLVRKVMLSTPI 565

Human   706 EAA-------KEVFVKIPQDSIAEIYNQCE-----------EQGMESPLPAEDDNAIREHLCIRA 752
            :.:       |.:..::|:.....:.|:..           ||...|.|..   |.| ||..:..
 Worm   566 DESVIRQIIRKALHFEVPKLLSQAVENEATVLSLITDGTLFEQKPGSQLAI---NKI-EHAALEF 626

Human   753 Y-LEAHETFNEW-----------FKHMNSVPQKPALI-----------------------PQPTF 782
            | |.:....|.:           ||:......:.::|                       .:.|.
 Worm   627 YGLCSFVDVNNFMITIALKLGLMFKYTPITDDELSMIGGVKRLDNTTAADWEASLRVRARAEQTL 691

Human   783 TEKV----AHEHKEKKYEMDFGIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVRED------AK 837
            .|:|    |.||..:     .|:.:.|||.:...::..:.|          :.||.:      |.
 Worm   692 REEVLKKRAAEHNTR-----VGMVQQHLDTVLPMLRGLVNN----------IGVRPEYFLSPRAN 741

Human   838 EDHERTHQMVL--LRKLCLPMLCFLL 861
            .|..|.|:..:  :|.|.||....||
 Worm   742 GDPMRVHRKEIQEIRNLFLPQFFILL 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NUP107NP_065134.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..66
Nup84_Nup100 209..908 CDD:461184 148/754 (20%)
npp-5NP_496481.1 Nup84_Nup100 113..>539 CDD:461184 111/544 (20%)
Blue background indicates that the domain is not in the aligned region.

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