DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRPC7 and trpc3

DIOPT Version :10

Sequence 1:NP_065122.1 Gene:TRPC7 / 57113 HGNCID:20754 Length:862 Species:Homo sapiens
Sequence 2:XP_002941939.2 Gene:trpc3 / 100490905 XenbaseID:XB-GENE-1014039 Length:917 Species:Xenopus tropicalis


Alignment Length:846 Identity:672/846 - (79%)
Similarity:760/846 - (89%) Gaps:10/846 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    12 RRHTTLREKGRRQAIRGPAYMFNEKGTSLTPEEERFLDSAEYGNIPVVRKMLEESKTLNFNCVDY 76
            ||.|.:||||||||:||||:|||.:|.:||.|||||||:||||||||||||||||||||.|||||
 Frog    78 RRVTMIREKGRRQAVRGPAFMFNNRGPNLTAEEERFLDAAEYGNIPVVRKMLEESKTLNVNCVDY 142

Human    77 MGQNALQLAVGNEHLEVTELLLKKENLARVGDALLLAISKGYVRIVEAILNHPAFAQGQRLTLSP 141
            |||||||||||||||||:||||||:||||:||||||||||||||||||||||||||..:||||||
 Frog   143 MGQNALQLAVGNEHLEVSELLLKKDNLARIGDALLLAISKGYVRIVEAILNHPAFAASKRLTLSP 207

Human   142 LEQELRDDDFYAYDEDGTRFSHDITPIILAAHCQEYEIVHILLLKGARIERPHDYFCKCNECTEK 206
            .||||:|||||:|||||||||.||||||||||||:||:||:||:|||:|||||||||||::||||
 Frog   208 CEQELQDDDFYSYDEDGTRFSPDITPIILAAHCQKYEVVHMLLVKGAKIERPHDYFCKCSDCTEK 272

Human   207 QRKDSFSHSRSRMNAYKGLASAAYLSLSSEDPVLTALELSNELARLANIETEFKNDYRKLSMQCK 271
            |:.|||||||||:||||||||.|||||||||||.||||||||||:|||||.||||||||||||||
 Frog   273 QKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVHTALELSNELAKLANIEKEFKNDYRKLSMQCK 337

Human   272 DFVVGVLDLCRDTEEVEAILNGDVNFQ-VWSDHHRPSLSRIKLAIKYEVKKFVAHPNCQQQLLTM 335
            ||||||||||||:|||||||||||:.: :.|..|||||||:|||||||||||||||||||||||:
 Frog   338 DFVVGVLDLCRDSEEVEAILNGDVDAEPIESQRHRPSLSRVKLAIKYEVKKFVAHPNCQQQLLTI 402

Human   336 WYENLSGLRQQSIAVKFLAVFGVSIGLPFLAIAYWIAPCSKLGRTLRSPFMKFVAHAVSFTIFLG 400
            |||||||||:|.||:|.|.|..|::||||||:.|||||||:|||.||||||||||||.||.|||.
 Frog   403 WYENLSGLREQPIAIKCLVVLVVALGLPFLAVGYWIAPCSRLGRILRSPFMKFVAHAASFIIFLC 467

Human   401 LLVVNASDRFEGVKTLPNETFTDYPKQIFRVKTTQFSWTEMLIMKWVLGMIWSECKEIWEEGPRE 465
            |||.||||||||:|||||.|..:|||||||||||:|:|||||||.|||||:||||||:|.|||||
 Frog   468 LLVFNASDRFEGIKTLPNITVIEYPKQIFRVKTTRFTWTEMLIMVWVLGMMWSECKELWLEGPRE 532

Human   466 YVLHLWNLLDFGMLSIFVASFTARFMAFLKATEAQLYVDQHVQDDTLHNVSLPPEVAYFTYARDK 530
            |:|.|||:|||||||||:|:||||.:||::||:||.|||:::|::.|..|:||||:.||||||||
 Frog   533 YILQLWNVLDFGMLSIFIAAFTARLLAFMQATKAQQYVDKYIQENDLSLVTLPPEIEYFTYARDK 597

Human   531 WWPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMI 595
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||:||||
 Frog   598 WLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMI 662

Human   596 GMFNLYSYYRGAKYNPAFTTVEESFKTLFWSIFGLSEVISVVLKYDHKFIENIGYVLYGVYNVTM 660
            |||.|||||.|||.|.||||||||||||||||||||||.||||||||||||||||||||:|||||
 Frog   663 GMFILYSYYLGAKVNSAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLYGIYNVTM 727

Human   661 VVVLLNMLIAMINNSYQEIEEDADVEWKFARAKLWLSYFDEGRTLPAPFNLVPSPKSFYYLIMRI 725
            |||||||||||||:||||||:|:||||||||:||||||||:|:|||.||::|||||||.|.|::|
 Frog   728 VVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSIVPSPKSFVYFILKI 792

Human   726 KMCLIKLCKSKAKSCENDLEMGMLNSKFKKTRY-QAGMRNSENLTANNTLSKPTRYQKIMKRLIK 789
                |.|.|.:.:..:.|.|:||.:||.:...: |:..|..|:.:.|:.:::|||||:|||||||
 Frog   793 ----INLFKCRRRRLQKDTEIGMGDSKSRLNLFSQSTTRVFESRSFNSIINQPTRYQQIMKRLIK 853

Human   790 RYVLKAQVDRENDEVNEGELKEIKQDISSLRYELLEEKSQATGELADLIQQLSEKFGKNLNKDHL 854
            ||||:||||:||||||||||||||||||||||||||:|||||.||:.||.:||||    ||...|
 Frog   854 RYVLRAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELSSLIHKLSEK----LNPGML 914

Human   855 R 855
            |
 Frog   915 R 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRPC7NP_065122.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 5/8 (63%)
trp 27..822 CDD:273311 639/796 (80%)
ANK 1 42..71 26/28 (93%)
ANK repeat 77..108 CDD:293786 27/30 (90%)
ANK 2 77..106 26/28 (93%)
ANK 3 108..134 25/25 (100%)
ANK repeat 109..155 CDD:293786 39/45 (87%)
ANK repeat 157..192 CDD:293786 28/34 (82%)
ANK 4 163..192 22/28 (79%)
trpc3XP_002941939.2 trp 93..886 CDD:273311 639/796 (80%)
ANK repeat 143..174 CDD:293786 27/30 (90%)

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