DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PSMD5 and CG12096

DIOPT Version :9

Sequence 1:NP_005038.1 Gene:PSMD5 / 5711 HGNCID:9563 Length:504 Species:Homo sapiens
Sequence 2:NP_001285190.1 Gene:CG12096 / 32269 FlyBaseID:FBgn0030457 Length:506 Species:Drosophila melanogaster


Alignment Length:534 Identity:133/534 - (24%)
Similarity:241/534 - (45%) Gaps:96/534 - (17%)


- Green bases have known domain annotations that are detailed below.


Human    21 ELRALHSVLQAVPLNELRQQAAELRLGPLFSLLNENHREKTTLCVSILERLL------QAMEPV- 78
            :|:||.|..|              ||..| :.:|....::..|...|:||||      ....|. 
  Fly    11 KLKALESKPQ--------------RLDAL-TAMNSAIAKEAALPRQIIERLLTTDQLYDCANPAA 60

Human    79 --HVARNLRVD-------------------------LQRGLIHPDDSVKILTLSQIGRIVENSDA 116
              ||.::..||                         |:|||.|.:.:::...|:.:.:.:.....
  Fly    61 DSHVPKDQAVDVTLELLCHCLDQLAMDTADEQLSSLLRRGLTHSNPALRAQVLASLFKKLLRQLT 125

Human   117 VTEILN--NAELLKQIVYCIGGENLSVAKAAIKSLSRI---SLTQAGLEALFESNLLDDLKSVMK 176
            |.::|.  |.||:..|:..:...:......||..||.:   .::.|.::|        .|..::|
  Fly   126 VGQVLTLPNNELIFLILDELKQPDTQSTSLAINILSIVLPQRISNADVQA--------KLVQLLK 182

Human   177 TNDIVRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTGEDVLVRATCIEMVTSLAYTHHGR 241
            .|:|||.|.|||.:.::..|...|:..|.  ::...|.||..:|||::|:.:|::..||..:||.
  Fly   183 QNEIVRCRAYELAVVLAKKSATLLSDVTF--ILDAALSELDNDDVLLQASVMELLVPLAEQNHGL 245

Human   242 QYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKFFGNLAVMDSPQQICERYPIFVEKVFEMIES 306
            .|:.:..|:|.||..:...:..|..:..:|..:||||.::|. .|.:|...||..:..:|..::|
  Fly   246 SYMERRRVLDIISYRVQRVEEHPLDALLVPSIMKFFGKISVY-QPLKIIGGYPHMLACLFMQLQS 309

Human   307 QDPTMIGVAVDTVGILGSNVEGKQVLQK--TGTRFERLLMRIGHQSKNAPVELKIRCLDAISSLL 369
            :|.:::..|:||:..|.:..:||.:|..  :|. .|:...:.|..:|.....:|.|.|::: .::
  Fly   310 EDESILPTAMDTLANLATTPQGKILLNMHFSGA-MEKSFKKYGSHTKKLSAHIKKRLLNSL-DVI 372

Human   370 Y---LPPEQQTDDLLRMTESWFSSLSRDPLELFRG---------ISSQPFPELHCAALKVFTAIA 422
            |   .||   ..:::.:.::|:        |.|.|         :.:.|||:|..|||.....|.
  Fly   373 YDFKTPP---ATEIINIGKNWY--------ECFAGGAHANIIMDLINTPFPDLQMAALSFLKTIC 426

Human   423 NQPWAQKLMFNSPGFVEYVVDRSVEHDKASKDAKYELVKALANSKTIAEIFGNPNYLRLRTYLSE 487
            ...|....:.|:.|.||:::.|..:..:..|..|:::::.|:.|   || |.....:|...|::|
  Fly   427 KYNWGIVALKNTGGAVEFLLSRQKDLHRDIKYMKWQIMEILSAS---AE-FSPTETIRFTAYVNE 487

Human   488 GPYYVKPVSTTAVE 501
            |||:|:.....|.|
  Fly   488 GPYHVQADLDVATE 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMD5NP_005038.1 Proteasom_PSMB 1..504 CDD:313688 133/534 (25%)
HEAT repeat 88..112 CDD:293787 6/23 (26%)
HEAT repeat 125..155 CDD:293787 7/32 (22%)
HEAT repeat 166..191 CDD:293787 10/24 (42%)
HEAT repeat 202..229 CDD:293787 8/26 (31%)
CG12096NP_001285190.1 Proteasom_PSMB 4..502 CDD:287479 133/534 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144599
Domainoid 1 1.000 141 1.000 Domainoid score I4741
eggNOG 1 0.900 - - E1_KOG4413
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37999
Inparanoid 1 1.050 141 1.000 Inparanoid score I4495
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59237
OrthoDB 1 1.010 - - D240962at33208
OrthoFinder 1 1.000 - - FOG0008750
OrthoInspector 1 1.000 - - oto89809
orthoMCL 1 0.900 - - OOG6_104314
Panther 1 1.100 - - LDO PTHR13554
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5738
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.800

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