DRSC/TRiP Functional Genomics Resources

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Protein Alignment C12orf4 and C55A6.10

DIOPT Version :9

Sequence 1:NP_001291740.1 Gene:C12orf4 / 57102 HGNCID:1184 Length:552 Species:Homo sapiens
Sequence 2:NP_001360533.1 Gene:C55A6.10 / 179581 WormBaseID:WBGene00008339 Length:549 Species:Caenorhabditis elegans


Alignment Length:546 Identity:159/546 - (29%)
Similarity:267/546 - (48%) Gaps:65/546 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    26 LELRVPLKFPVQENASHLHGRLMLLHSLPC--FIE-KDLKEALTQFIEEESLSDYDRDAEASL-- 85
            :.::||:..|   ..|:|...:..|.:.|.  |:: :..||||.:||..|:::..:|...:::  
 Worm    34 VRIQVPIPLP---EYSYLEDWVGKLRAQPSGKFLDYEGAKEALRKFIYSETINHQNRRTISNIEC 95

Human    86 AAVKSGEVDLHQLASTWAKAYAETTLEHARPEEPSWDEDFADVYHDLIHSPASETLLNL-EHNYF 149
            |..|..|:.:    ..:..:.....||..|.....::|.|..|    :...:||.||.| ....|
 Worm    96 AVKKKREMGM----PLFQPSRNRRLLEPRRKPVVPFEEKFTYV----VEQSSSENLLTLMRMEVF 152

Human   150 V--SISELIGERDVELKKLRERQGIEMEKVMQELGKSLTDQDVNSLAAQHF-ESQQDLENKWSNE 211
            :  .::::|..|:.|:.:|.:    :.||::.|.|    |.|::....... |..:.:...:|.:
 Worm   153 MKKQMTDMIRARNWEVDQLSK----QCEKLVAETG----DPDMHPHKISMLNEKLRQVHTTYSFQ 209

Human   212 LKQSTAIQKQEYQEWVIKLHQDLKNPNNSSLSEEIKVQPSQFRESVEAIGRIYEEQRKLEESFTI 276
            :...:..||.:|::.|..|:.....|  :.|.:::.:........|......|.:  .:.|||||
 Worm   210 VADLSDTQKSKYRKAVDSLYSRGSIP--AELLDDVILDEHAIPRPVATTTGGYAD--GVNESFTI 270

Human   277 H--LGAQLKTMHNLRLLRADML-DFCKHKRNHRSGVKLHRLQTALSLYSTSLCGLVLLVDN---- 334
            :  :|:|||:|||:.|:..|.| |.|:....  ......||:.|..|||.:|.|..|||..    
 Worm   271 YIAIGSQLKSMHNVCLVTVDRLTDLCQTLEG--DWTTSSRLEMATKLYSRNLSGTTLLVPRDPMM 333

Human   335 RINSYSGIKRDFATVCQECTDFHFPRIEEQLEVVQQVVLYARTQRRSKLKESLDSGNQNGGNDDK 399
            .|||.|    ||..:|::.||.||..:.|||    :..|.|..:|.|...:.:|........:.|
 Worm   334 HINSSS----DFFKICEQSTDLHFDSLAEQL----KKTLAANRERNSWKADKIDEETSKLIAEGK 390

Human   400 T-------KNAERNYLNVLPGEFYITRHSNLSEIHVAFHLCVDDHVKSGNITARDPAIMGLRNIL 457
            |       .:|.|.......|:.||||||||.::.:.:||.||:.::|..|.:|.|.:.|:|||:
 Worm   391 TPPEQLVPSSALRQDPTCTVGDVYITRHSNLHKVQIVYHLVVDETLQSLEINSRHPCLAGVRNII 455

Human   458 KVCCTHDITTISIPLLLVHDMSEEMTIPWCLRRAELVFKCVKGFMMEMASWDGGIS------RTV 516
            :....::.:||.|||||:....|..||.|||:|||::||||||::||:.|   |:.      ..|
 Worm   456 RTAARYNTSTIHIPLLLIDRPDESTTIAWCLKRAEMLFKCVKGYLMEVCS---GMDVESLPHYNV 517

Human   517 QFLVPQSISEEMFYQLSNMLPQIFRV 542
            .|::|..:|..::..::||.|.||.:
 Worm   518 HFVLPSGLSPTIYTAITNMFPSIFHL 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C12orf4NP_001291740.1 DUF2362 41..546 CDD:313393 156/531 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..403 3/26 (12%)
C55A6.10NP_001360533.1 DUF2362 49..547 CDD:370836 154/528 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161471954
Domainoid 1 1.000 180 1.000 Domainoid score I2339
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10685
Inparanoid 1 1.050 183 1.000 Inparanoid score I3009
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D285902at33208
OrthoFinder 1 1.000 - - FOG0007202
OrthoInspector 1 1.000 - - oto21517
orthoMCL 1 0.900 - - OOG6_106014
Panther 1 1.100 - - LDO PTHR16525
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3086
SonicParanoid 1 1.000 - - X5311
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.930

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