DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMC5 and Gk1

DIOPT Version :10

Sequence 1:NP_002796.4 Gene:PSMC5 / 5705 HGNCID:9552 Length:406 Species:Homo sapiens
Sequence 2:NP_524655.1 Gene:Gk1 / 43913 FlyBaseID:FBgn0025592 Length:538 Species:Drosophila melanogaster


Alignment Length:464 Identity:88/464 - (18%)
Similarity:152/464 - (32%) Gaps:161/464 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    26 SKIEELQLIVNDKSQNLRRLQ------AQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKK 84
            |.:|||...:.:.::|:..|:      ........|:|.||:.:.:          |.:||:|..
  Fly   128 STVEELLETIPNNARNINYLRPLCGLPLSPYFSGVKLRWLRDNVPV----------VSQAMEKGT 182

Human    85 VLVKVHPEGKFVVDV----------DKNIDINDVTPNCRVALRN------DSYTLHKI-LPNKVD 132
            .:..       .:|.          |..:...|||...|..|.|      |:..|... ||..:.
  Fly   183 AMFG-------TIDTWLMYNLTGGKDCGVHKTDVTNASRTMLMNIETLQWDANLLKFFGLPKTIL 240

Human   133 PLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKG----VLLYGPPG 193
            |.:.         |:.|..|.:.:.:                .:.:||....|    .|:     
  Fly   241 PEIC---------SSSEFYGSIAQGV----------------LQGIGITSVLGDQQAALV----- 275

Human   194 TGKTLLARAVA---HHTDCTFIRVSGSELVQKFIG----EGARMVRELF-VMAREHAPSII---- 246
             |:..||:..|   :.|.|..:..:|..:|....|    .|.::.|:.. ..|.|.:.||.    
  Fly   276 -GQQCLAKGQAKATYGTGCFLLYNTGPSIVHSTHGLLTTVGYQLGRKAVPFYALEGSVSIAGAAF 339

Human   247 --FMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGF-------------------------E 284
              ..|.::.|.:|       |..|...:.::  |.||.:                         |
  Fly   340 NWLRDNMNLIQNS-------GQIETMASTVD--NSLDVYFVPAFNGLYAPYWNQDARGVICGLSE 395

Human   285 ATKNIKVIMATNRI------DILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGIN 343
            .|.:..::.||...      |||||.     ..|.||.......:..:.:..:..:..:...||.
  Fly   396 ETTSEHIVRATLEAVCFQVRDILDSM-----HKDCKIPLAKLMVDGGMTVNNLFLQLQSDLVGIQ 455

Human   344 L--RKIAELMP-GASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKD--------SEK 397
            :  .||||... ||:.|..|.|          |.|..:     |..::|...::        :::
  Fly   456 VLRAKIAETTALGAAMAAYKAV----------ENRYQM-----EAPLSKSGPREAIKPSISATDR 505

Human   398 NMSIKKLWK 406
            |:..:| ||
  Fly   506 NLRYQK-WK 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMC5NP_002796.4 PRK03992 24..400 CDD:179699 85/456 (19%)
May mediate interaction with PRPF9. /evidence=ECO:0000250|UniProtKB:P62196 186..406 53/275 (19%)
Gk1NP_524655.1 ASKHA_NBD_FGGY_GK1-3-like 18..519 CDD:466802 88/464 (19%)

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