DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMC5 and CG11594

DIOPT Version :10

Sequence 1:NP_002796.4 Gene:PSMC5 / 5705 HGNCID:9552 Length:406 Species:Homo sapiens
Sequence 2:NP_647848.2 Gene:CG11594 / 38473 FlyBaseID:FBgn0035484 Length:548 Species:Drosophila melanogaster


Alignment Length:218 Identity:45/218 - (20%)
Similarity:72/218 - (33%) Gaps:79/218 - (36%)


- Green bases have known domain annotations that are detailed below.


Human    57 RLLREELQLLQ----EQGSY--------------VGEVVRAMDKKKV----------LVKVHPEG 93
            |:|.:.:|.:|    |.|.|              |.:|:..:||.||          ||.:.|:|
  Fly    27 RVLEQAVQTIQTWNPEPGYYNQSSDNIWQSICQVVKKVIGGVDKSKVKGIGFDATCSLVVLGPQG 91

Human    94 KFVV-----DVDKNI-------------DINDVTPNC------RVALRNDSYTLHKILPNKVDPL 134
            ..:.     :.::||             :||....:.      :|:|..:...|..:..|.....
  Fly    92 SPLTVSKSGEAEQNIILWMDHRAEQETQEINAFKHSLLKYVGGQVSLEMEVPKLLWLKRNLSQTF 156

Human   135 VSLMMVEKVPDSTYEMIGGLDKQI------------------KEIKEVIELPVKHPELFEALGIA 181
            .::..|..:||.......|:|.:.                  ||..:..:|.......||.||..
  Fly   157 GNIWRVFDLPDFLTWRATGVDTRSLCSVVCKWNYDAANGSWNKEFLKQADLEELTQNNFEKLGSD 221

Human   182 QPKGVLLYGPPG--TGKTLLARA 202
                   ..|||  .||.|.|:|
  Fly   222 -------VQPPGRTVGKGLTAKA 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMC5NP_002796.4 PRK03992 24..400 CDD:179699 45/218 (21%)
May mediate interaction with PRPF9. /evidence=ECO:0000250|UniProtKB:P62196 186..406 8/19 (42%)
CG11594NP_647848.2 5C_CHO_kinase 6..540 CDD:273552 45/218 (21%)

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