DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMC5 and CG8298

DIOPT Version :10

Sequence 1:NP_002796.4 Gene:PSMC5 / 5705 HGNCID:9552 Length:406 Species:Homo sapiens
Sequence 2:NP_610718.1 Gene:CG8298 / 36282 FlyBaseID:FBgn0033673 Length:596 Species:Drosophila melanogaster


Alignment Length:113 Identity:29/113 - (25%)
Similarity:42/113 - (37%) Gaps:36/113 - (31%)


- Green bases have known domain annotations that are detailed below.


Human   159 KEIKEVIELPVKHPELFE-------ALGIAQPKGVLLYGPPGTG------------------KTL 198
            |..:|.||...|:..:.|       |:||...:|..:.....||                  |||
  Fly    62 KNTQECIETAYKNLVILEINPRDIIAIGIVNQRGTSVLWNLETGQPLHNAIGWSDCRSTPILKTL 126

Human   199 LARAVAHHTDCTFIRV-SGSELVQKFIGEGARMVRELFVMAREHAPSI 245
            | ..|.|:.|  ::|. ||..|...|   .|..:|.|.    :|.|::
  Fly   127 L-HNVRHNVD--YVRYRSGLPLSSCF---SALKIRWLM----DHVPAV 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMC5NP_002796.4 PRK03992 24..400 CDD:179699 29/113 (26%)
May mediate interaction with PRPF9. /evidence=ECO:0000250|UniProtKB:P62196 186..406 19/79 (24%)
CG8298NP_610718.1 ASKHA_ATPase-like 19..540 CDD:483947 29/113 (26%)

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