DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tspeara and clos

DIOPT Version :9

Sequence 1:XP_698991.2 Gene:tspeara / 570420 ZFINID:ZDB-GENE-120215-12 Length:676 Species:Danio rerio
Sequence 2:NP_001097246.3 Gene:clos / 5740204 FlyBaseID:FBgn0261016 Length:1836 Species:Drosophila melanogaster


Alignment Length:361 Identity:85/361 - (23%)
Similarity:138/361 - (38%) Gaps:116/361 - (32%)


- Green bases have known domain annotations that are detailed below.


Zfish   334 LDIELFQIPSVGLFAAMAHRATKPGSG-----IYRW--SHGHFQLYQNISTFKAQAWKQFTIGKK 391
            |||.:.|:|:| .:|...|   |..:|     :|.|  :...:||...:.|.||.|........:
  Fly    75 LDICILQLPTV-KYATALH---KNAAGVRHFAVYTWRPAEQDYQLLVELETPKAVALDCLAFAGR 135

Zfish   392 MFLAVS-NSMGPA----DGEP-------------------------------ELSVV-------- 412
            .::||| |...|.    :|.|                               ||:::        
  Fly   136 GYVAVSYNLTEPVSQAREGSPIYEISPETGIRTVQYFSGTHLRGMYLRISSQELTLLHAFESNAQ 200

Zfish   413 ---YRWSNKRLKFVPYQTLETHSARDWEAFQINNEAFLAVANHRTENGNHNIESVVYKWNPGTKT 474
               ::|..|  .|.....:....||..|||.|:...::||||:....|.....|.:::|:..::.
  Fly   201 CPYFKWMGK--SFQRLGAIHCSKARRMEAFGIDYTDYVAVANYADAEGRTATHSEIFRWDAKSQR 263

Zfish   475 FEVNQTILTSGAYDWEFFT-----VGPYHFLAVANAFDGTSTQ---TDSSIYIWLGGAFQVFQTI 531
            |::.|.:.::||.|.::|:     |...|||.:.|...||..:   .|:.||::..|.|..:|.:
  Fly   264 FQLFQRLRSNGAVDVKYFSLPVNEVSRRHFLILGNTIGGTGAEVGDADTVIYVFEKGQFVPYQRL 328

Zfish   532 RTFGATDWEMFQIGNRVFLAVANGHMLCEKGPSLYTINSTIYELDMTTKMFLKFQDIVTYSAVDW 596
             :|.|.:        || |.|.  |.:.||...|...|.               ||:..|:..||
  Fly   329 -SFYALE--------RV-LPVQ--HSISEKFLLLVACNK---------------QDVKIYNLNDW 366

Zfish   597 EF---------------------FTVGDEHFLVVAN 611
            .|                     :..||:.:||:||
  Fly   367 RFEESKVQFTEGALSRGVARMRSYEEGDQSYLVIAN 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tspearaXP_698991.2 EPTP 475..520 CDD:281697 16/52 (31%)
EPTP 525..576 CDD:281697 13/50 (26%)
EPTP 581..627 CDD:281697 12/52 (23%)
EPTP 632..672 CDD:281697
LamG 68..228 CDD:304605
EPTP 369..416 CDD:281697 15/93 (16%)
EPTP 421..469 CDD:281697 13/47 (28%)
closNP_001097246.3 EPTP 263..315 CDD:281697 14/51 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594803
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto39660
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15261
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4919
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.930

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