DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCNL1 and CycT

DIOPT Version :10

Sequence 1:NP_064703.1 Gene:CCNL1 / 57018 HGNCID:20569 Length:526 Species:Homo sapiens
Sequence 2:NP_524127.2 Gene:CycT / 39961 FlyBaseID:FBgn0025455 Length:1097 Species:Drosophila melanogaster


Alignment Length:601 Identity:144/601 - (23%)
Similarity:237/601 - (39%) Gaps:134/601 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    11 AAAAASSAAPSAGGSSSGTTTTTTTTTGGILIGDRLYSEVSLTIDHSL---------IPEERLSP 66
            ||.|:||::.||..|:||                     :.:|.:::|         ...::|:.
  Fly    11 AATASSSSSASAAASASG---------------------IPITANNNLPFEKDKIWYFSNDQLAN 54

Human    67 TPSMQDGLDLPSETDLRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMA 131
            :||.:.|:....|...|.:...|||..|..|::.|:.:.|..|..|||:...||.......:|.|
  Fly    55 SPSRRCGIKGDDELQYRQMTAYLIQEMGQRLQVSQLCINTAIVYMHRFYAFHSFTHFHRNSMASA 119

Human   132 CINLASKIEEAPRRIRDVINVFHHLRQLRGKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCV 196
            .:.||:|:||.||::..||         |......|...:|||.....:::..|..:|:.|||.|
  Fly   120 SLFLAAKVEEQPRKLEHVI---------RAANKCLPPTTEQNYAELAQELVFNENVLLQTLGFDV 175

Human   197 HVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLR-TNVFVRFQPETIACACIYLAAR--ALQ 258
            .:.|||..:|...|:::..::  |.||::...::||. |::.::::|..:||.|||||.:  ..:
  Fly   176 AIDHPHTHVVRTCQLVKACKD--LAQTSYFLASNSLHLTSMCLQYRPTVVACFCIYLACKWSRWE 238

Human   259 IPLPTR-PHWFLLFGTTE--EEIQEICIETLRLYTRKKPNYELLEKEVEKRKVALQEAKLKA--- 317
            ||..|. .|||.....|.  :.::::..|.:.:| .|.|  ..|:.::...|...|.|..:.   
  Fly   239 IPQSTEGKHWFYYVDKTVSLDLLKQLTDEFIAIY-EKSP--ARLKSKLNSIKAIAQGASNRTANS 300

Human   318 --------------KGLNPDGTPALSTLGGFSPASKPSSPREVKAEEKSPISINVKTVKKEPEDR 368
                          ||.:.:.|.....|.|.....:.......:..|:.|.|: :......|:.|
  Fly   301 KDKPKEDWKITEMMKGYHSNITTPPELLNGNDSRDRDRDRERERERERDPSSL-LPPPAMVPQQR 364

Human   369 QQASKSPYNGVRKDSKRSRNSRSASRSRSRTRSRSRSH---------TPRRH---------YNNR 415
                       |:|....|:|..:....|.:.|.|.||         .|..|         ||||
  Fly   365 -----------RQDGGHQRSSSVSGVPGSSSSSSSSSHKMPNYPGGMPPDAHTDHKSKQPGYNNR 418

Human   416 ------RS------RSGTYSSRSRSRSRSHSESPRR------HHN--------------HGSPHL 448
                  ||      .||:.|.||.|.|.|.|:.|.|      :|.              ||| |.
  Fly   419 MPSSHQRSSSSGLGSSGSGSQRSSSSSSSSSQQPGRPSMPVDYHKSSRGMPPVGVGMPPHGS-HK 482

Human   449 KAKHTRDDLKSSNRHGHKRKKSRSRSQSKSRDHSDAAKKHRHERGHHRDRRERSRSFERSHKSKH 513
            ....::..........|....:.|.|...|:|.|.:.|.:.:....:.:...::....|......
  Fly   483 MTSGSKPQQPQQQPVPHPSASNSSASGMSSKDKSQSNKMYPNAPPPYSNSAPQNPLMSRGGYPGA 547

Human   514 HGGSR----SGHGRHR 525
            ..||:    :|:|.||
  Fly   548 SNGSQPPPPAGYGGHR 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCNL1NP_064703.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 10/24 (42%)
CYCLIN_SF 40..195 CDD:477360 41/163 (25%)
Cyclin-like 1 88..190 30/101 (30%)
CYCLIN_SF 199..321 CDD:477360 36/144 (25%)
Cyclin-like 2 203..287 24/89 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..526 57/262 (22%)
RS 390..432 20/71 (28%)
CycTNP_524127.2 CYCLIN_CCNT_rpt1 45..174 CDD:410241 39/137 (28%)
CYCLIN_CCNT_rpt2 179..268 CDD:410242 26/90 (29%)

Return to query results.
Submit another query.