DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMC1 and Rpt6R

DIOPT Version :10

Sequence 1:NP_002793.2 Gene:PSMC1 / 5700 HGNCID:9547 Length:440 Species:Homo sapiens
Sequence 2:NP_651811.1 Gene:Rpt6R / 43635 FlyBaseID:FBgn0039788 Length:399 Species:Drosophila melanogaster


Alignment Length:358 Identity:170/358 - (47%)
Similarity:243/358 - (67%) Gaps:1/358 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    75 EEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV 139
            ::..:|.|.|...|..|....|.::..|:.....:..:.:.:|.|..:|......::.|.:...:
  Fly    33 QKNLLRLQAQRNELNLKVRLLREELQLLQEQGSYIAEVVKPMDKNKVLVKVHPEGKYVVDVDKTI 97

Human   140 DKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
            :...:.|...|.|.::.:.:..:|.:..||||::|.|||.|..||..:||||.|||||||.:|||
  Fly    98 NIKDVTPSSRVALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELP 162

Human   205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE 269
            :.|||.::.:||..||||:|||||||||||||:|||:.|..||:||.||||:||::|:|.::|||
  Fly   163 VKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 227

Human   270 LFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI 334
            ||.:|.||||||:|:||||:||:.|.::.: |:.|:||||||||||||||::..::|||||||||
  Fly   228 LFVMAREHAPSIIFMDEIDSIGSARLETGT-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRI 291

Human   335 ETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAIC 399
            :.||.||:||||||||||||.|:|:.:..|.:||:.:|.|...:.|..:.......|||::|.:|
  Fly   292 DVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVC 356

Human   400 TEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432
            ||||:.||||||:.||.|||:.:...|:.|..|
  Fly   357 TEAGMYALRERRVHVTQEDFEMAVSKVMMKDSE 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMC1NP_002793.2 PTZ00361 1..440 CDD:185575 170/358 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..104 5/19 (26%)
Rpt6RNP_651811.1 PRK03992 21..395 CDD:179699 170/358 (47%)
Blue background indicates that the domain is not in the aligned region.

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