DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMC1 and Rpt5

DIOPT Version :10

Sequence 1:NP_002793.2 Gene:PSMC1 / 5700 HGNCID:9547 Length:440 Species:Homo sapiens
Sequence 2:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster


Alignment Length:398 Identity:183/398 - (45%)
Similarity:261/398 - (65%) Gaps:32/398 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    59 RLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIID------ 117
            |.:|:..| ||   :|:.|.||...:::...||.::...|:...:..|..|..:.|::|      
  Fly    33 RTRLMDNE-IK---IMKSEVIRITHEIQAQNEKIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEE 93

Human   118 ---------DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTD 168
                     ||.     |::.||....:::.::..||.:.|:||..|.:|...:.::..|..:.|
  Fly    94 EDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYD 158

Human   169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKT 233
            ..|..|:|::.|.|.|:||||||.||||:.|:|.||:||.|.::.:||.|||||:||||||||||
  Fly   159 ARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVLLYGPPGTGKT 223

Human   234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSN 298
            |||:|.|.||.:|||::.|.:|:|.::|||.||||:.|.:|:|.||:|:||||:|||||||:||.
  Fly   224 LLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSE 288

Human   299 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
            ..|:||:||||||||||||||.|..|:|||.||||::.|||||:|.||:|||||||.|:|:.:.|
  Fly   289 KAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPALLRSGRLDRKIEFPHPNEEARAR 353

Human   364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDF--------K 420
            |.|||:.:|.:::||..::|..:.||.:||..||:|.|||::|||.....||:|||        .
  Fly   354 IMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDFMDAIMEVQA 418

Human   421 KSKENVLY 428
            |.|.|:.|
  Fly   419 KKKANLNY 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMC1NP_002793.2 PTZ00361 1..440 CDD:185575 183/398 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..104 3/19 (16%)
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 180/391 (46%)
Blue background indicates that the domain is not in the aligned region.

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