DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chd2 and kis

DIOPT Version :9

Sequence 1:XP_021323365.1 Gene:chd2 / 569795 ZFINID:ZDB-GENE-050419-256 Length:1817 Species:Danio rerio
Sequence 2:NP_001137761.1 Gene:kis / 33185 FlyBaseID:FBgn0266557 Length:5517 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chd2XP_021323365.1 CHROMO <312..357 CDD:237991
Chromo 391..456 CDD:306815
SNF2_N 479..>1054 CDD:331286
DUF4208 1459..1549 CDD:316429
DUF4045 <1503..>1796 CDD:330572
kisNP_001137761.1 BASP1 1554..1786 CDD:283191
HepA 1676..2527 CDD:223627
SDA1 <1693..>1854 CDD:283052
CHROMO <1879..1919 CDD:237991
Chromo 1941..1996 CDD:278797
DEXDc 2048..2197 CDD:238005
Helicase_C 2350..2464 CDD:278689
RR_TM4-6 3728..>3877 CDD:283990
BRK 4569..4613 CDD:197800
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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