DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mapk10 and rl

DIOPT Version :9

Sequence 1:NP_001305248.1 Gene:mapk10 / 569698 ZFINID:ZDB-GENE-051120-117 Length:486 Species:Danio rerio
Sequence 2:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster


Alignment Length:394 Identity:154/394 - (39%)
Similarity:242/394 - (61%) Gaps:41/394 - (10%)


- Green bases have known domain annotations that are detailed below.


Zfish    35 QHYNMSKSKVDNQFYSVEVGDSTFTVLK--------RYQNLKPIGSGAQGIVCAGYDAVLDRNVA 91
            :.:|.|.|.| |...|.||..|...|::        ||..|..||.||.|:|.:..|.:.::.||
  Fly     2 EEFNSSGSVV-NGTGSTEVPQSNAEVIRGQIFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVA 65

Zfish    92 IKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQV 156
            |||:| ||::||:.:|..||:.::....|:|||.:.::.... |:::.:|||:|..||:.:|.::
  Fly    66 IKKIS-PFEHQTYCQRTLREITILTRFKHENIIDIRDILRVD-SIDQMRDVYIVQCLMETDLYKL 128

Zfish   157 IQME-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG----- 215
            ::.: |.::.:.|.|||:|.|:|::|||.::||||||||:::...|.|||.||||||.|.     
  Fly   129 LKTQRLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNKTCDLKICDFGLARIADPEHDH 193

Zfish   216 TSFMMTPYVVTRYYRAPEVIL-GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 279
            |.| :|.||.||:|||||::| ..||.:::||||||||:.||:.::.:|||:.|:||.|.::..|
  Fly   194 TGF-LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVL 257

Zfish   280 GTPSPEFMK-KLQPTVRNYVENRPKYAGLTFPKLFPDCLFPADSEHNKLKASQARDLLSKMLIID 343
            |:||.:.:: .:....|||:|:.|....:.:.||||:    ||        :.|.|||.|||..:
  Fly   258 GSPSRDDLECIINEKARNYLESLPFKPNVPWAKLFPN----AD--------ALALDLLGKMLTFN 310

Zfish   344 PAKRISVDEALQHPYINVWYDPAEVEAARNQQISMPPPQIYDKQLDEREHSIDEWKELIYKEVMN 408
            |.|||.|:|||.|||:..:|||.:      :.::..|.:|   .::..:.|.|..|.||::|.:.
  Fly   311 PHKRIPVEEALAHPYLEQYYDPGD------EPVAEVPFRI---NMENDDISRDALKSLIFEETLK 366

Zfish   409 FEER 412
            |:||
  Fly   367 FKER 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mapk10NP_001305248.1 STKc_JNK 63..406 CDD:270840 140/350 (40%)
S_TKc 64..359 CDD:214567 128/302 (42%)
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 141/357 (39%)
S_TKc 38..326 CDD:214567 128/302 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D741207at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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