Sequence 1: | XP_021335317.1 | Gene: | cacna1ab / 569528 | ZFINID: | ZDB-GENE-090514-3 | Length: | 2336 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
Alignment Length: | 2371 | Identity: | 525/2371 - (22%) |
---|---|---|---|
Similarity: | 903/2371 - (38%) | Gaps: | 760/2371 - (32%) |
- Green bases have known domain annotations that are detailed below.
Zfish 58 PIPVR---------------------QNCLTV-----NRSLFLFSED---------NIVRKYAKK 87
Zfish 88 ITEWPPFEWMILTTIIANCIVLALEQHLPVGDKTPLSERLEETEPYFIAIFCFESGIKILALGFA 152
Zfish 153 FHKGSYLRNGWNVMDFVVVLTGILSSVGSEL-DLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA 216
Zfish 217 MIPLLQIGVLLFVAILMFAIIGLEFYMGKFHTTC---------FNTITGEMYDERP--------- 263
Zfish 264 --------C----GARTCDANNTQCQGYWLGPNYGITQFDNVLFAVLTVFQCITMEGWTDMLYYS 316
Zfish 317 NDALGSAWNWMYYVPLIIIGSFFMLNLVLGVLSGEF------AKERERVE----NRSEFLKLKRQ 371
Zfish 372 QQIERELNGYLE----------------------WICKAEEVIL-AEDDNDTGSRRRPTLKKNKA 413
Zfish 414 D-------LLNPQEGVDHMGDSV-----------GSPF--ARGSMS--------GKG-------- 442
Zfish 443 -------------------DE----TPFSK----------------------------------- 449
Zfish 450 --------------KERRLR--------------------------------------------- 455
Zfish 456 ----FLIRKMVKTQ-------------------------------AFYWTV-------------- 471
Zfish 472 --------------------------ISL--------------VALNTLCVAVVHYDQPELLSDF 496
Zfish 497 LYYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFDCAVIVGSIFEVVWAMVKPGTSFGISVLR 561
Zfish 562 ALRLLRIFKVTKYWASLRNLVVSLL-NSMKSIISLLFLLFLFIVVFALLGMQLFGGQFN-----F 620
Zfish 621 ELG-TPPTNFDTFPAAIMTVFQILTGEDWNVVMYDGIKSQGGVDKGMIFSV-FFIVLTLFGNYTL 683
Zfish 684 LNVFLAIAVDNLA----NAQELTKDEQEEEEATTQ--KMALQKAKEVAEVSPLSAANLSIAAKEQ 742
Zfish 743 QKNSKGSKSVWEQRTSEIRRQNLMTSREALYNELDAEDHWKMNYRNRPDVKTHLDRPLVVNPQEN 807
Zfish 808 RNNNTNKPRPDDPNPQERSEEHPSRSHHHHSHHHHHHHHHTHHSSRQSLHLPELAETGFECDVEG 872
Zfish 873 AGEHRRPRHHQH--RRRDED-------GGERGRKHRDHHSRGETAGGDAEDGQEKRQRRHRHANH 928
Zfish 929 GDGDGRRERSRLHRNKKEGSLSTARPIQPGLPHTESQYSEDLDNLRNSSKMAIHDPDPDLYDPYY 993
Zfish 994 DPEQANNLLNLRGPDLHDSSLILTDSSKLEHTAIDMPPIYPSLNAKLQVNKNANTEPAKEGEKKE 1058
Zfish 1059 EEEDDGGDEE-------GHKRIPPFSSCFILSTTNPFRRCCHYILTLRYFEMCILSVIAMSSIAL 1116
Zfish 1117 AAED------PVSQDSERNKVLRYFDYVFTGVFTFEMLIKMVVLGLILHEGSYFRDLWNFLDFVV 1175
Zfish 1176 VSGALVAFAFTSFSGGSGKGKDISIIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNIL 1240
Zfish 1241 IVYMLFMFIFAVVAVQLFKGRFFYCTDESKEFARDCRGEYLVYE---RDNEVKSQKREWKKYDFH 1302
Zfish 1303 YDNVLWALLTLFTVSTGEGWPDVLKHSVDSTYENRGPSPGYRMEMSIF---YVVYFVVF-PFFFV 1363
Zfish 1364 NIFVALIIITFQEQGDK--------MMEDYSLEKNERACIDFAINAKPLTRHMPQNKQSFQYRMW 1420
Zfish 1421 QFVVSPPFEYSIMSLIALNTIILMMKYNGASDAYDKVLKNLNIVFTTFFFMESILKIIAFGVR-N 1484
Zfish 1485 FFRDAWNIFDFVSVIGSITDILVTELVNN-FINLSFLRLFRAA---RLIKLLRQGETIRILLWTF 1545
Zfish 1546 VQSFKALPYVCLLIAILFFIYAIIGMQLFGNLALDDEGAINEHNNFRTFFMALMLLFRSATGEAW 1610
Zfish 1611 HDIMLSCLGGMPCEPEE----VGSECGS-NVAYAYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRD 1670
Zfish 1671 -SSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLP 1734
Zfish 1735 VADDNTVHFNSTLMALIRTALDIKIAKGGADKHQMDAELRKEMMAIWPNLSQKNLDLLVTPHKSA 1799
Zfish 1800 TDLTVGKIYAAMMIMEYYRQSKAKKLQALREEQNRTPLMFQRMEPSPNQEGGPGLNGLPELPQEP 1864
Zfish 1865 VNSLPPEVGMNESQSWVTSRAQEMCQKSVPENWNPDRP--------YPDDHHDSRHNPQTVEMRE 1921
Zfish 1922 FGPVGDGYSDTEPYHPMEGHGRTISMPRLSADNQRRRHRPRGSNLSTITDTSPMRRSTSSLVHGR 1986
Zfish 1987 SGRG---------VRLDDYSLERVVSEEGHR 2008 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cacna1ab | XP_021335317.1 | Ion_trans | 91..360 | CDD:306908 | 91/305 (30%) |
Ion_trans | 465..703 | CDD:306908 | 79/334 (24%) | ||
Ion_trans | 1099..1335 | CDD:306908 | 86/244 (35%) | ||
Ion_trans | 1425..1672 | CDD:306908 | 81/257 (32%) | ||
GPHH | 1673..1743 | CDD:318993 | 19/69 (28%) | ||
Ca_chan_IQ | 1745..1820 | CDD:312334 | 11/74 (15%) | ||
Herpes_ICP4_C | 1841..>2243 | CDD:332854 | 32/185 (17%) | ||
PAT1 | <2144..2300 | CDD:330585 | |||
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 82/282 (29%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 17/132 (13%) | ||
Ion_trans | 835..1028 | CDD:278921 | 64/205 (31%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 50/392 (13%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 95/278 (34%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 13/55 (24%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 75/238 (32%) | ||
GPHH | 1880..1930 | CDD:293510 | 17/54 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |