DRSC/TRiP Functional Genomics Resources

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Protein Alignment MRPS22 and mrps22

DIOPT Version :9

Sequence 1:NP_064576.1 Gene:MRPS22 / 56945 HGNCID:14508 Length:360 Species:Homo sapiens
Sequence 2:XP_002933390.2 Gene:mrps22 / 100485976 XenbaseID:XB-GENE-1000283 Length:326 Species:Xenopus tropicalis


Alignment Length:321 Identity:189/321 - (58%)
Similarity:236/321 - (73%) Gaps:23/321 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    40 LPCSFEMGLPRRRFSSEAAESGSPETKKPTFMDEEVQSILTKMTGLNLQKTFKPAIQELKPPTYK 104
            :|||....||:                   |.|.||||:|.|||||||:|.|.|..|:||||:||
 Frog    28 VPCSSASSLPQ-------------------FTDPEVQSLLKKMTGLNLEKVFPPIKQKLKPPSYK 73

Human   105 LMTQAQLEEATRQAVEAAKVRLKMPPVLEERVPINDVLAEDKILEGTETTKYVFTDISYSIPHRE 169
            |:|:.|.:|..::|..||:..|||||||.||.||:.:||||.||...||.|||||||:||.||||
 Frog    74 LLTEEQYQETVQKAALAAEKCLKMPPVLNERKPIDSILAEDTILCDVETAKYVFTDITYSTPHRE 138

Human   170 RFIVVREPSGTLRKASWEERDRMIQVYFPKEGRKILTPIIFKEENLRTMYSQDRHVDVLNLCFAQ 234
            ||||||||:|.||||:|||||||||||||.||||::.|.:|:.||::.::.||||.::||.|..|
 Frog   139 RFIVVREPNGVLRKATWEERDRMIQVYFPHEGRKLVPPPVFQAENMQILFKQDRHEELLNRCLVQ 203

Human   235 FEPDSTEYIKVHHKTYEDIDKRGKYDLLRSTRYFGGMVWYFVNNKKIDGLLIDQIQRDLIDDATN 299
            |:|||.|||:|||.||||::..||||||||||:||||.||....|||||||||.||||::|||.|
 Frog   204 FDPDSAEYIRVHHHTYEDVELHGKYDLLRSTRHFGGMAWYLCCRKKIDGLLIDMIQRDMLDDAIN 268

Human   300 LVQLYHVLHPDGQSAQGAKDQAAEGINLIKVFAKTEAQKGAYIELTLQTYQEALSRHSAAS 360
            ||:|||:||||.:.|:  :.:.|:|:.|||::.|.|:||..||||.||.||::||  .|||
 Frog   269 LVRLYHMLHPDSECAK--ESRGADGVELIKIYVKMESQKPRYIELALQAYQQSLS--GAAS 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRPS22NP_064576.1 MRP-S22 70..309 CDD:402036 158/238 (66%)
mrps22XP_002933390.2 MRP-S22 39..278 CDD:402036 158/238 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 344 1.000 Domainoid score I7625
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H57030
Inparanoid 1 1.050 384 1.000 Inparanoid score I9321
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG48815
OrthoDB 1 1.010 - - D209345at32523
OrthoFinder 1 1.000 - - FOG0007406
OrthoInspector 1 1.000 - - oto150058
Panther 1 1.100 - - LDO PTHR13071
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4394
SonicParanoid 1 1.000 - - X5531
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1313.110

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