DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMB1 and Prosalpha3T

DIOPT Version :10

Sequence 1:NP_002784.1 Gene:PSMB1 / 5689 HGNCID:9537 Length:241 Species:Homo sapiens
Sequence 2:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster


Alignment Length:259 Identity:54/259 - (20%)
Similarity:91/259 - (35%) Gaps:74/259 - (28%)


- Green bases have known domain annotations that are detailed below.


Human     3 SSTAMYSAPGR----DLGMEPHRAAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSI 63
            |.|.::|..||    :..||   ||.           ..||.:.:..::..::|::..:.     
  Fly     7 SRTTIFSPEGRLYQVEYAME---AAS-----------QSGTCVGLLAKNGVLLATERSVD----- 52

Human    64 HTRDSPKCYKLTDKTV-----------IGC--SGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGA 115
                     ||.|.::           |.|  :|...|...|...:....:.|:.:..:.:....
  Fly    53 ---------KLMDTSIPVPRISWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQ 108

Human   116 IAAMLSTILYSRRFF----PYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKA------GGSAS 170
            :...|..|..:...:    |:.|..:..|.|......:|..||.|:|  ..:||      .|:|.
  Fly   109 LVTNLCDIKQAYTQYGGKRPFGVSFLYMGWDCRFGFQLYQSDPSGNY--SGWKATCIGRKSGAAM 171

Human   171 AMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFIS----AAERDVYTGDALRICIVTKEG 230
            .|||         |.:.:..:|..|::.|    |||.|.    ...||..|.:.|.|..|.:.|
  Fly   172 EMLQ---------KELFSKGYVSPSVEEA----KDVAIKVMGMTLGRDSLTPEKLEIAFVQRYG 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMB1NP_002784.1 proteasome_beta_type_1 30..241 CDD:239726 45/228 (20%)
Prosalpha3TNP_651843.1 Ntn_hydrolase 3..218 CDD:469781 52/253 (21%)

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