DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMB1 and Prosbeta6

DIOPT Version :9

Sequence 1:NP_002784.1 Gene:PSMB1 / 5689 HGNCID:9537 Length:241 Species:Homo sapiens
Sequence 2:NP_524115.1 Gene:Prosbeta6 / 39855 FlyBaseID:FBgn0002284 Length:235 Species:Drosophila melanogaster


Alignment Length:232 Identity:116/232 - (50%)
Similarity:172/232 - (74%) Gaps:5/232 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    15 LGME---PHRAAGPLQLRFSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTD 76
            ||.|   .::..|.....||||..|||:|:||||:|||::|:|||||.|::||:|...|.:||:.
  Fly     4 LGFEQFPDYQVPGMKHPDFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSP 68

Human    77 KTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGL 141
            :||:|.:|...|.|:||..|:.|::.|:|::.:.|||.|:|.|||..:|:||||||||.||:.|:
  Fly    69 QTVLGSAGCWADTLSLTGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGI 133

Human   142 DEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNM--QNVEHVPLSLDRAMRLVK 204
            |.||||.|||:||:|..::.:::|||:|..:|||:||||:|.|||  ::.:.:.|:.:||:.:..
  Fly   134 DNEGKGVVYSYDPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVAS 198

Human   205 DVFISAAERDVYTGDALRICIVTKEGIREETVSLRKD 241
            |.||||||||:||||::.|.|:||:||...|::||:|
  Fly   199 DTFISAAERDIYTGDSVLINIITKDGIEVRTLTLRQD 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMB1NP_002784.1 proteasome_beta_type_1 30..241 CDD:239726 111/212 (52%)
Prosbeta6NP_524115.1 proteasome_beta_type_1 22..235 CDD:239726 111/212 (52%)
PRE1 24..225 CDD:223711 104/200 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165160454
Domainoid 1 1.000 217 1.000 Domainoid score I2688
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2087
Inparanoid 1 1.050 243 1.000 Inparanoid score I3324
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54193
OrthoDB 1 1.010 - - D1092660at2759
OrthoFinder 1 1.000 - - FOG0004805
OrthoInspector 1 1.000 - - oto91695
orthoMCL 1 0.900 - - OOG6_101631
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1009
SonicParanoid 1 1.000 - - X3385
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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