DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMB1 and Prosbeta5R1

DIOPT Version :9

Sequence 1:NP_002784.1 Gene:PSMB1 / 5689 HGNCID:9537 Length:241 Species:Homo sapiens
Sequence 2:NP_611776.1 Gene:Prosbeta5R1 / 37690 FlyBaseID:FBgn0034842 Length:315 Species:Drosophila melanogaster


Alignment Length:197 Identity:44/197 - (22%)
Similarity:80/197 - (40%) Gaps:10/197 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    36 NGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARL 100
            :|.|.|........|:.:|:|.:.|..|.::...|..:|.|..:...:|...||:...:::....
  Fly    70 HGTTTLGFKYRGGVILCADSRATSGQYIGSQTMRKIVELNDYMLGTLAGGAADCVYWDRVLAKEC 134

Human   101 KMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKA 165
            ::::....|.||....|.::..|....:.....:..::.|.|:||...:| .|..|........:
  Fly   135 RLHQLRYRKRMTVDTAARIICNISTEYKGMGLVMGMMLAGFDDEGPKLIY-VDSEGMRSHGQVFS 198

Human   166 GGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGDALRICIVTKEG 230
            .||.|.....:||  .|::       ..||...|..|.:.....|..:|.|:|..:|:..:..||
  Fly   199 VGSGSPYALGVLD--TGYR-------YDLSDQEAYDLARRAIYHATSKDAYSGGIVRLYHIHSEG 254

Human   231 IR 232
            .|
  Fly   255 WR 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMB1NP_002784.1 proteasome_beta_type_1 30..241 CDD:239726 44/197 (22%)
Prosbeta5R1NP_611776.1 PTZ00488 39..272 CDD:185666 44/197 (22%)
proteasome_beta_type_5 72..259 CDD:239730 43/195 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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