DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PSMB1 and Prosalpha5

DIOPT Version :9

Sequence 1:NP_002784.1 Gene:PSMB1 / 5689 HGNCID:9537 Length:241 Species:Homo sapiens
Sequence 2:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster


Alignment Length:237 Identity:58/237 - (24%)
Similarity:93/237 - (39%) Gaps:72/237 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    37 GGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLT-DKTV-----IGC--SGFHGDCLTLT 93
            |.|.:.|...:..::|.:.|::         ||.....| :|.|     |||  ||...|..|| 
  Fly    34 GSTAIGICTPEGVVLAVEKRIT---------SPLMVPSTVEKIVEVDKHIGCATSGLMADARTL- 88

Human    94 KIIEARLKMYKH--SNNKAMTTGAIAAMLSTI--------------LYSRRFFPYYVYNIIGGLD 142
             |..||::...|  ..|:.|:..:.|..:||:              ..||   |:.|..:..|: 
  Fly    89 -IERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSR---PFGVAILFAGI- 148

Human   143 EEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRA----MRLV 203
            |.|:..::..||.|::.|...||.||.|...|         :|:|::....|:||.|    :..:
  Fly   149 EAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQ---------QNLQDLFRPDLTLDEAIDISLNTL 204

Human   204 K------------DVFISAAERDVYTGDALRICIVTKEGIRE 233
            |            :|.....||:.|        :.|||.:.:
  Fly   205 KQVMEEKLNSTNVEVMTMTKEREFY--------MFTKEEVEQ 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMB1NP_002784.1 proteasome_beta_type_1 30..241 CDD:239726 58/237 (24%)
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 58/237 (24%)
proteasome_alpha_type_5 8..222 CDD:239722 52/211 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.