DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMA5 and Prosalpha4

DIOPT Version :10

Sequence 1:NP_002781.2 Gene:PSMA5 / 5686 HGNCID:9534 Length:241 Species:Homo sapiens
Sequence 2:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster


Alignment Length:239 Identity:81/239 - (33%)
Similarity:136/239 - (56%) Gaps:10/239 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEI 70
            |.|||.|..|||:|.|.|||||.||::.||||:|::.:..|.|.|||:..:.|.|...:.||..:
  Fly     3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICML 67

Human    71 DAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSR 135
            |.|:..|.:||.|||:.:|::|:||.|:|.....:.:|:|.:|:.::.|..::.:.:.     .|
  Fly    68 DNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNG-----RR 127

Human   136 PFGVALLFGGVDEKG-PQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKE--AIKS 197
            |||::.|.||.|..| ..||..:|||.|.:..|.|.|.:::..:...::.|.:.....|  |:|.
  Fly   128 PFGISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKL 192

Human   198 SLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI 241
            ::..|.:|.:...|  |:|:|.::.|:...|...:.:.:.:|.|
  Fly   193 AIRALLEVAQSGQN--NLEVAIMENGKPLKMLDTDVITDYVKII 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMA5NP_002781.2 proteasome_alpha_type_5 8..220 CDD:239722 76/214 (36%)
Prosalpha4NP_525092.1 proteasome_alpha_type_7 5..213 CDD:239724 76/214 (36%)

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