DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMA2 and Prosalpha5

DIOPT Version :10

Sequence 1:NP_002778.1 Gene:PSMA2 / 5683 HGNCID:9531 Length:234 Species:Homo sapiens
Sequence 2:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster


Alignment Length:237 Identity:83/237 - (35%)
Similarity:126/237 - (53%) Gaps:8/237 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     6 YSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITK 70
            |...:.||||.|:|.|:|||:.|:..|:.::||....|||||.||:..|.|....:|.|:..:.|
  Fly     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVDK 72

Human    71 HIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGG-------VR 128
            |||...||:..|.|.|:.|||...|.::.||.|.:......|.|:::..::..||.       .|
  Fly    73 HIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSR 137

Human   129 PFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAIL 193
            ||||::|..|...|:|.|:..||||.:....|.|:|......:..|:..:..||.|::||..::.
  Fly   138 PFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLN 202

Human   194 TLKESFEGQMTEDNIEV-GICNEAGFRRLTPTEVKDYLAAIA 234
            |||:..|.::...|:|| .:..|..|...|..||:.::..||
  Fly   203 TLKQVMEEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNIA 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMA2NP_002778.1 proteasome_alpha_type_2 6..231 CDD:239719 81/232 (35%)
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 76/213 (36%)

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