DRSC/TRiP Functional Genomics Resources

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Protein Alignment PSMA2 and Prosalpha6T

DIOPT Version :10

Sequence 1:NP_002778.1 Gene:PSMA2 / 5683 HGNCID:9531 Length:234 Species:Homo sapiens
Sequence 2:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster


Alignment Length:247 Identity:73/247 - (29%)
Similarity:120/247 - (48%) Gaps:26/247 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLA----TEKKQKSILYDERS 61
            |....|....||:||.|:|.|:|||:.||..||.:||:|..:..|||    |.|...::      
  Fly     1 MFRNQYDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAALCRTSKDTNTL------ 59

Human    62 VHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGG 126
            ..|:.|:..|:|:..:|:..|.||:....|.....|...|....|..:||..:.:.:|..||...
  Fly    60 QRKIMPVDDHVGMSIAGLTADARVVCQYMRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYD 124

Human   127 VRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYN--EDLELEDAIH 189
            .||:||.||:.|::|..|:::|..|:......||.|:|....:.:|:||:...  ||.::::.|.
  Fly   125 RRPYGVGLLVAGYDEQGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLERNMESFEDCDMDELIC 189

Human   190 TAILTLKESFEGQMTEDNIE--------VGICNEAGFRRLTPTEVKDYLAAI 233
            .||    ::..|.:..|::|        ||  .:..|:..|..|.:.|:..:
  Fly   190 HAI----QAIRGSLGSDDVENLTINVAIVG--KDVPFKMFTEAENQKYVKLV 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PSMA2NP_002778.1 proteasome_alpha_type_2 6..231 CDD:239719 72/238 (30%)
Prosalpha6TNP_609623.1 proteasome_alpha_type_1 6..215 CDD:239718 66/218 (30%)

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