DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mbnl1 and mbl

DIOPT Version :9

Sequence 1:XP_030108561.1 Gene:Mbnl1 / 56758 MGIID:1928482 Length:436 Species:Mus musculus
Sequence 2:NP_001261046.1 Gene:mbl / 36945 FlyBaseID:FBgn0265487 Length:956 Species:Drosophila melanogaster


Alignment Length:472 Identity:168/472 - (35%)
Similarity:222/472 - (47%) Gaps:126/472 - (26%)


- Green bases have known domain annotations that are detailed below.


Mouse     9 RDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSREN--CKYLHP 71
            :|::||.|||||||||..|||.|||||||||..:.:|:||:|.||:||:||||:|:.  |||.||
  Fly    14 KDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACYDSIKGRCNRDKPPCKYFHP 78

Mouse    72 PPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVNIMQQSFQKRGGDCISRWEGS 136
            |.|||.||.|||||:|             .|.||:|....:.|                    |.
  Fly    79 PQHLKDQLLINGRNHL-------------ALKNALMQQMGIAP--------------------GQ 110

Mouse   137 PYYTGSDTIYQYCTVEPMFSVAPSLATSASAAFNPYLGPV-----SPSLVPAEILPT--APMLVT 194
            |..:|.               .|::||      ||||..:     ||......::|.  .|..||
  Fly   111 PVISGQ---------------VPAVAT------NPYLTGIPANSYSPYYTTGHLVPALLGPDPVT 154

Mouse   195 GNPGVPVPAAAAAAAQKLMRTDRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMD 259
            ...|..||.....|.||:.|:||||||||:.||.|.|.|::||||||.:| :...:|.::|||||
  Fly   155 SQLGPVVPQTVQVAQQKIPRSDRLEVCREFLRGACKRAESECRFAHPQES-VARHDDGSITVCMD 218

Mouse   260 YIKGRCSREKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMT--------QSAVKSLKRP 316
            .:||||:|:.|:|||||.||||::||||   .:|.|..|||.....|        .|....:|..
  Fly   219 AVKGRCARDPCRYFHPPLHLQAQLKAAQ---TRATAVAAAAAVWLYTIYFSILFEPSLCMDVKTV 280

Mouse   317 LEATFDLGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQAL-------------------AN 362
            ....:|......::|  .||||.||:  ...|:..|...|||.:                   ..
  Fly   281 GSFYYDNFQFSGMVP--FKRPAAEKS--GIPVYQPGATAYQQLMQPYVPVSCEYPQQQQQPPPQQ 341

Mouse   363 MQLQQH-------TAFLPPGSILCMTPATS---------------VVPMVHGATPATVSAATTSA 405
            .|.|||       ...|...|::..|..|:               ::..|..:|..|.||.||::
  Fly   342 QQQQQHQQQNVLLQQQLQLSSVITTTSTTATASNNMINNNINNKGIINAVMASTNITSSATTTAS 406

Mouse   406 TSV------PFAATATA 416
            :|:      |...|.||
  Fly   407 SSLLSALGTPPTTTTTA 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mbnl1XP_030108561.1 ZnF_C3H1 217..241 CDD:214632 16/23 (70%)
mblNP_001261046.1 ZnF_C3H1 175..201 CDD:214632 17/25 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837605
Domainoid 1 1.000 149 1.000 Domainoid score I4407
eggNOG 1 0.900 - - E1_KOG2494
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 155 1.000 Inparanoid score I4290
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001679
OrthoInspector 1 1.000 - - otm42996
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12675
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2627
SonicParanoid 1 1.000 - - X1238
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.880

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