DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment matk and Src42A

DIOPT Version :9

Sequence 1:XP_695792.1 Gene:matk / 567405 ZFINID:ZDB-GENE-070705-183 Length:445 Species:Danio rerio
Sequence 2:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster


Alignment Length:456 Identity:154/456 - (33%)
Similarity:219/456 - (48%) Gaps:74/456 - (16%)


- Green bases have known domain annotations that are detailed below.


Zfish     8 AGTQCVAKKDHCKPKDGEISYHKGDILTLVGPGMRKGEYTARHNTTGEEGQVSGSNLREREALRI 72
            |.|:|..|......|.|:              ..|..|:|            .|..|.|:.    
  Fly  1175 ATTKCFGKTSLTTAKKGK--------------SRRLSEFT------------RGEFLNEKS---- 1209

Zfish    73 DPKLSLMPWFHGKIAGQQAVDK--LKPTEDGLFLVRESVRHPGDFVLCVCFSQKVFHYRVIYQD- 134
                    |:..||...:|..|  |...|.|.||:|:|.....|:.|.|.....|.|||:...| 
  Fly  1210 --------WYFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDE 1266

Zfish   135 NKLTIDNMQFFDNLIDMIEFYSRNRGAIATLLLKP------KKKEGLKSAETKLLKSGWLLDLSK 193
            ....|.....|..|.:::|.||::...:...|.||      ...||| |..|   :..|.:|.:.
  Fly  1267 GGFFIARRTTFRTLQELVEHYSKDSDGLCVNLCKPCVQIEKPVTEGL-SHRT---RDQWEIDRTS 1327

Zfish   194 LTLGEIIGEGEFGAVFAGEYTGQR-VAVKIIKC-DVTAQAFLEETSVMTNLHHKNLVPLLGV-IL 255
            |.....:|.|:||.|:.|.:.... ||:|.:|. .:..:.||.|..:|..|.|..|:.|..| .:
  Fly  1328 LKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTV 1392

Zfish   256 HNGLHIVTELMTKGNLVNFLRS---RGRFAVSVIQLLRFALDVCEGMEHLESKKLLHRDLAGRNI 317
            ...::|:||||..|:|:.:|::   :|| ::.:..|:..|..:..||.:|||:..:|||||.||:
  Fly  1393 EEPIYIITELMKHGSLLEYLQAIAGKGR-SLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNV 1456

Zfish   318 LVSEDGVAKISDFGL----------ARVGSMAVDNSKLPVKWTAPEALKNKKFSTQSDVWSYGVL 372
            ||.:..:.||:||||          ||||      ::.|:|||||||....|||.:|||||:|:|
  Fly  1457 LVGDGNIVKIADFGLARLIKEDEYEARVG------ARFPIKWTAPEAANYSKFSIKSDVWSFGIL 1515

Zfish   373 LWEIFSYGRQPYPKMTVNEVKECVEKGYRMDPPDECPADVYSIMTSCWQTEPKKRPSFHKLRERL 437
            |.|:.:|||.|||.||..||...||.||||..|..|...:|.||..||..:|.:||:|..|:.:|
  Fly  1516 LTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYEIMLECWHKDPMRRPTFETLQWKL 1580

Zfish   438 E 438
            |
  Fly  1581 E 1581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
matkXP_695792.1 SH3_CHK 9..67 CDD:212745 10/57 (18%)
SH2_csk_like 77..174 CDD:198190 29/105 (28%)
PTKc_Chk 187..440 CDD:270666 108/268 (40%)
STYKc 194..437 CDD:214568 104/258 (40%)
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 27/90 (30%)
PTKc_Frk_like 1319..1587 CDD:270653 108/270 (40%)
Pkinase_Tyr 1328..1580 CDD:285015 104/258 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.