DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myo5b and zip

DIOPT Version :9

Sequence 1:XP_021324561.1 Gene:myo5b / 567402 ZFINID:ZDB-GENE-031219-7 Length:1840 Species:Danio rerio
Sequence 2:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster


Alignment Length:1985 Identity:540/1985 - (27%)
Similarity:859/1985 - (43%) Gaps:444/1985 - (22%)


- Green bases have known domain annotations that are detailed below.


Zfish    13 VWIPDPDEVWRSAEIIKDYKEGDTVLHLKLEDESTLEYPIGSKDNPLPFLR------NPDILVGE 71
            ||:|..::.:.:|.|.:::  ||.|           |..:......:..||      ||......
  Fly    82 VWVPHENQGFVAASIKREH--GDEV-----------EVELAETGKRVMILRDDIQKMNPPKFDKV 133

Zfish    72 NDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLHIYGEEVINAYSGQNMGDMD 136
            .|:..|:.|:|.:||||:|.|:. |..||||.|:..|.:|||::|.||.|:::..|.|....::.
  Fly   134 EDMAELTCLNEASVLHNIKDRYY-SGLIYTYSGLFCVVVNPYKKLPIYTEKIMERYKGIKRHEVP 197

Zfish   137 PHIFAVAEEAFKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFFATVGGS--------------- 186
            ||:||:.:.|::.|..|.::|||:.:||||||||.:.|..::|.|.|..|               
  Fly   198 PHVFAITDSAYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPHPAVLI 262

Zfish   187 ------------------ANDT-------------------NVEEKVLASSPIMEAIGNAKTTRN 214
                              .|.|                   .:|:::|.::||:||.|||||.:|
  Fly   263 NFSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNAKTVKN 327

Zfish   215 DNSSRFGKYIQIGFDRRYHIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASCSLPEFKDLTL 279
            ||||||||:|:|.||....|.|||:.||||||||.:.||::||.:||||||.|..:..:.:...|
  Fly   328 DNSSRFGKFIRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQREKFIL 392

Zfish   280 TSAEDFTYTSLGENIFIEGVNDAEDLVKTREALTMLGVKENHQMSIFKIIASILHLGNVEIVQER 344
            ...:.:.:.|.| ::.:.||:|..:...|.:::.::|:......|||:|::::|..|:::..|||
  Fly   393 DDVKSYAFLSNG-SLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAVLLFGSMKFRQER 456

Zfish   345 DGESCHINRNDTHLHHFCRLLGIEQEQMENWLCRRKLVTTSETYVKNMPHSQAVNARDALAKHIY 409
            :.:...:..| |.......|||:....|.......::....:...|.....|...|.:|:||..|
  Fly   457 NNDQATLPDN-TVAQKIAHLLGLSVTDMTRAFLTPRIKVGRDFVTKAQTKEQVEFAVEAIAKACY 520

Zfish   410 AHLFDWIVEHINKSLHTSTKQ-HSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKL 473
            ..:|.|:|..||:||..:.:| .||||:||:.|||.||:|||||.||||.||||||.||..:|.|
  Fly   521 ERMFKWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFIL 585

Zfish   474 EQEEYMKEQIPWTLIDF-YDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYSKHSGSGH 537
            |||||.:|.|.|..||| .|.||.||||:...||:.||||||..||.||:.:..||.|.||....
  Fly   586 EQEEYQREGIEWKFIDFGLDLQPTIDLIDKPGGIMALLDEECWFPKATDKTFVDKLVSAHSMHPK 650

Zfish   538 FEKPRMSN-KSFIVVHFADKVEYQCDGFLEKNRDTVYEEQINILKASKFQLVADLFDDAKDAAPH 601
            |.|..... ..|.:||:|.:|:|....:|.||.|.:.|..:::|:.|:...|.:::.||:.....
  Fly   651 FMKTDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDAEIVGMA 715

Zfish   602 PGSKT-SRINVRPAKPAPKGHNREHRKTVGTQFRNSLHLLMETLNATTPHYVRCIKPNDYKESFV 665
            ..:.| ::...|    ..||..|    ||...::..|..||:||..|.|::||||.||..|.:..
  Fly   716 QQALTDTQFGAR----TRKGMFR----TVSHLYKEQLAKLMDTLRNTNPNFVRCIIPNHEKRAGK 772

Zfish   666 FDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMTKKDLSVG--DKKQVCKNLLEI 728
            .|:...:.|||..||||.|||...|:|:|..:.:|..||. |:|...:..|  |.|:.|:.:::.
  Fly   773 IDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYE-LLTPNVIPKGFMDGKKACEKMIQA 836

Zfish   729 LIKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRFACIKIQKTVRGWLQRIRYRK--IRKSAI-T 790
            |..|.:.::.|::|||||||.:|:||:.|..|.....:..|...||:|.|..|:|  .:.:|| .
  Fly   837 LELDSNLYRVGQSKIFFRAGVLAHLEEERDFKISDLIVNFQAFCRGFLARRNYQKRLQQLNAIRI 901

Zfish   791 LQRYGRGYLARRYAEMLRL-TRA---AVICQKQYRMVQVRREYLRVRRAVITIQAFTRGMFIRRL 851
            :||....||..|..:..|| |:.   ..:.:::.::||...|..:||..:.|:...|        
  Fly   902 IQRNCAAYLKLRNWQWWRLYTKVKPLLEVTKQEEKLVQKEDELKQVREKLDTLAKNT-------- 958

Zfish   852 YQEFLLHHKAMIIQKTVRGWLVRKKYQRSRYAAIVIQCFYRRVRAKRQLKQL--KIEARSAEHFK 914
             ||:...::..:::||.   |..:........|...:...|.:..|::|:.:  ::|.|..|..:
  Fly   959 -QEYERKYQQALVEKTT---LAEQLQAEIELCAEAEESRSRLMARKQELEDMMQELETRIEEEEE 1019

Zfish   915 K-LNVGMENKIVQLQ-KKMDNQSKELKSQNENLAVAKTVLETEV--------------SKLSKEL 963
            : |.:|.|.|.::|. :.::.|.:|.::..:.|.:.|..|:.::              .||.||.
  Fly  1020 RVLALGGEKKKLELNIQDLEEQLEEEEAARQKLQLEKVQLDAKIKKYEEDLALTDDQNQKLLKEK 1084

Zfish   964 ETLRTRQVAGTQMTSLQEELEKLRAELQEAH-AHKKLLEEEFSNEKQGLEQRVEELEKENTVLKK 1027
            :.|..|....:|..:.:||..|..|:|:..| |....|||....::|..::......|..|.:..
  Fly  1085 KLLEERANDLSQTLAEEEEKAKHLAKLKAKHEATISELEERLHKDQQQRQESDRSKRKIETEVAD 1149

Zfish  1028 EKEEMN-RRIQTSTQDQGGDVSQKESRLQHEL---DDERQRYQNLVKEYSRLEQRYENLQEDMSS 1088
            .||::| ||:|  ..:....::::|..|...|   |:|........|....||.:...:|||:.:
  Fly  1150 LKEQLNERRVQ--VDEMQAQLAKREEELTQTLLRIDEESATKATAQKAQRELESQLAEIQEDLEA 1212

Zfish  1089 MKFHPGHRRNPSNQSSLGSDSNYPSISLSEVGDTDDTIQQVEEMGIEKAAMDLSVFMKLQKRVRE 1153
                                                  ::......||...|||         .|
  Fly  1213 --------------------------------------EKAARAKAEKVRRDLS---------EE 1230

Zfish  1154 LEQERKRLQTNLDKV---EELSKRKGSE---AKNSTSEDDIN-----ADLAYNSLKRQELETENK 1207
            ||..:..|..:||..   :||..::..|   .|.|..|:.:|     ||:.:.  ..|||.:.|.
  Fly  1231 LEALKNELLDSLDTTAAQQELRSKREQELATLKKSLEEETVNHEGVLADMRHK--HSQELNSIND 1293

Zfish  1208 KLKNDLNELRKAV--------------ADRASENNSSN------------------ELQDGYNLL 1240
            :|:|    ||||.              ||.|:|..|.|                  |||    :.
  Fly  1294 QLEN----LRKAKTVLEKAKGTLEAENADLATELRSVNSSRQENDRRRKQAESQIAELQ----VK 1350

Zfish  1241 LSQLKAANEELDVRKEEVLMLKTQIVNSTRQTENLNHINSNDVSEWTDNKSPVNTEDRVDAPASK 1305
            |::::.|..||   :|:...|:.:..|.|.|.|                      |..:.|.|:.
  Fly  1351 LAEIERARSEL---QEKCTKLQQEAENITNQLE----------------------EAELKASAAV 1390

Zfish  1306 NKAQDWGYLNEDGELGLAYQGLKQVARLLETQLQTQTRQHRDELEALHTQIE---LLKDNLEKKQ 1367
            ..|.     |.:.:|..|.|.|::..| .:..|.::.||...|.|||..|:|   ..|.|.|:| 
  Fly  1391 KSAS-----NMESQLTEAQQLLEEETR-QKLGLSSKLRQIESEKEALQEQLEEDDEAKRNYERK- 1448

Zfish  1368 DMLDHFSTLSPDALVEFSVQ-QEITRLTNENLDLKELVEKLEKNEKKLKKQLRIYMKKVQEL--- 1428
                         |.|.:.| |||.:...|:.|   |.::||:.:|:|.|.:....::|:||   
  Fly  1449 -------------LAEVTTQMQEIKKKAEEDAD---LAKELEEGKKRLNKDIEALERQVKELIAQ 1497

Zfish  1429 -------------EVTQAT-KSRPELTRQFTVQRREKDFEGMLEYYK-------------EDEAL 1466
                         |:..|| :...:.|:...:::::|:|:.:|...|             |.||.
  Fly  1498 NDRLDKSKKKIQSELEDATIELEAQRTKVLELEKKQKNFDKILAEEKAISEQIAQERDTAEREAR 1562

Zfish  1467 LVKTLVTDMKPNAVSATVPCLPAYILFMCIRHADYINDDQKVHSLLTATINAIKKVLKKNNDDFE 1531
            ..:|.|..:.                    |..|...|  |:..|...     :|.|:...||  
  Fly  1563 EKETKVLSVS--------------------RELDEAFD--KIEDLENK-----RKTLQNELDD-- 1598

Zfish  1532 MTSFWLANASRLLHCLKQYSGDEAFMTQNSAKQNEHCLK------NFDLAEYRQVLSDL--SIQI 1588
                 |||                  ||.:|.:|.|.|:      ...|||.:....:|  .:|:
  Fly  1599 -----LAN------------------TQGTADKNVHELEKAKRALESQLAELKAQNEELEDDLQL 1640

Zfish  1589 YQQLVKVAEANMQPMIVSAMLESESIPSLAGVKPMGYRNRSSSVDCESGGPAGYTLQALIKQLAQ 1653
            .:......|.|||.:  .:..|.:.:....|                    |....:.|:|||..
  Fly  1641 TEDAKLRLEVNMQAL--RSQFERDLLAKEEG--------------------AEEKRRGLVKQLRD 1683

Zfish  1654 FYSTMADHGLDPEISQQVLRQLFYSINAVTLNNLLLRKDVCSWSTGMQLRYNISQLEEWLRGKNL 1718
            .     :..||.|..|:         .|...:...|..|:....|.|::...:.           
  Fly  1684 L-----ETELDEERKQR---------TAAVASKKKLEGDLKEIETTMEMHNKVK----------- 1723

Zfish  1719 HQCGAVATMEPVIQAAQLLQVKKK----TSQDAEAICSLCTALSLQQIVKILNLYTPLNEFEERV 1779
                     |..::.|:.||.:.|    .:::|:|......|||.:...|:..|...:.:..|.:
  Fly  1724 ---------EDALKHAKKLQAQVKDALRDAEEAKAAKEELQALSKEAERKVKALEAEVLQLTEDL 1779

Zfish  1780 TVS-----FIRDIQNRLQDRIENN----QLLADTK 1805
            ..|     .....::.|.:.|.||    .|:.|.|
  Fly  1780 ASSERARRAAETERDELAEEIANNANKGSLMIDEK 1814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myo5bXP_021324561.1 Myosin_head 7..1371 CDD:332202 446/1497 (30%)
MYSc_Myo5 83..746 CDD:276831 265/720 (37%)
Myo5b_CBD 1461..1835 CDD:271261 70/379 (18%)
zipNP_523860.2 Myosin_N 80..117 CDD:280832 9/47 (19%)
Myosin_head 133..854 CDD:278492 269/732 (37%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 265/720 (37%)
Myosin_tail_1 931..2011 CDD:279860 232/1111 (21%)
Prefoldin 1431..1515 CDD:298833 25/100 (25%)
FAM76 <1847..1926 CDD:292665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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