DRSC/TRiP Functional Genomics Resources

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Protein Alignment CLDND1 and CG6398

DIOPT Version :10

Sequence 1:NP_001035272.1 Gene:CLDND1 / 56650 HGNCID:1322 Length:276 Species:Homo sapiens
Sequence 2:NP_573244.1 Gene:CG6398 / 32761 FlyBaseID:FBgn0030870 Length:290 Species:Drosophila melanogaster


Alignment Length:261 Identity:64/261 - (24%)
Similarity:99/261 - (37%) Gaps:48/261 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    29 ATAFVIACVLSLISTIYMAASIGTDFWYEYRSPVQENSSDLNKSIW----DEFISDEADEKT--- 86
            |....||.:.::|:|..:|.:..||.|..|             .:|    ..|.:..:|.::   
  Fly     5 AVTLSIATICAIIATALLAIAFSTDNWLHY-------------DVWRNQIQSFAAKHSDAESLLH 56

Human    87 -YNDALFRYNGTVGLWRRCITIPKNMHWYSPPER---TESFDVVTKCVSFTLTEQFMEKFVDPGN 147
             .|...:.|..|.||:|.|  .||.    .||..   |....:.|.|.:.....|..::.:...:
  Fly    57 NMNVKYYYYTRTRGLFRIC--YPKE----RPPVSAVPTYLSPIETHCSNIDYFPQAEDEKIANED 115

Human   148 HNSGIDLLRTYLWRCQFLLPFVSLGLMCFGAL-IGLCACICRSLYPTIATGILHLLAGLCTLGSV 211
            ..|.:.|.|:.:  ..|::.||::    |.|. .||..|..||.....||.||.|:..|...|::
  Fly   116 ATSRLHLARSCI--ALFIISFVTI----FCAFWTGLSGCWKRSSGAITATSILLLVTCLLAAGAM 174

Human   212 SCY----------VAGIELLHQ-KLELPDNVSGEFGWSFCLACVSAPLQFMASALFIWAAHTNRK 265
            ..:          |.|.:...| ...|.||....:.||:.:|........:||.|...||...|.
  Fly   175 GLWHTVEFFEKEKVVGEDYFQQWNTVLRDNTKIAYDWSYIVAWAGIGTCLLASILLSGAAVCLRN 239

Human   266 E 266
            |
  Fly   240 E 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CLDND1NP_001035272.1 PMP22_Claudin 40..257 CDD:473919 57/239 (24%)
CG6398NP_573244.1 Claudin_2 16..232 CDD:372799 57/240 (24%)

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