DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment myh11b and Mhc

DIOPT Version :9

Sequence 1:XP_017210292.1 Gene:myh11b / 566080 ZFINID:ZDB-GENE-101124-2 Length:2005 Species:Danio rerio
Sequence 2:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster


Alignment Length:1978 Identity:759/1978 - (38%)
Similarity:1178/1978 - (59%) Gaps:70/1978 - (3%)


- Green bases have known domain annotations that are detailed below.


Zfish     4 QDNDDSNKFLFLDSEFKNSGVAQADWSTRKMVWIPSERDGFQSASIKEETGNEVVVELDNGQKVT 68
            |:::|...:||:..|.:....:: .:.::|..|||.|::|:....||...|:.|.|.|..|:...
  Fly     8 QEDEDPTPYLFVSLEQRRIDQSK-PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGEVRD 71

Zfish    69 VSKDDIQKMNPPKFNKVEDMAALTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKMLPIYS 133
            :..:.::|:|||||.|:||||.:|.||...||||||:||::.|||||||||||.|||||..|:|:
  Fly    72 IKSEKVEKVNPPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPVYT 136

Zfish   134 EKIIEMYKGKKRHEVPPHIYSVTDNAYRNMLQEREDQSILCTGESGAGKTENTKKVIQYLAVVAS 198
            .:..:||:||:|:||||||::::|.||.:||....:||:|.||||||||||||||||.|.|.|.:
  Fly   137 NRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGA 201

Zfish   199 SHKGKKEATSDTSSSAPNKQQKGSQLAFGELEKQLLQANPILEAFGNAKTIKNDNSSRFGKFIKI 263
            |.|        |..:|.:|         |.||.|::|.||:|||||||||::|||||||||||:|
  Fly   202 SKK--------TDEAAKSK---------GSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRI 249

Zfish   264 NFDNTGYIVGANIETYLLEKSRCIRQAKIERSFHIFYYMVAGAKDKMREELLLED-FANYRFLVA 327
            :|..||.:.||:||||||||:|.|.|..:|||:||||.:::|:...:::..||.| ..:|..:..
  Fly   250 HFGPTGKLAGADIETYLLEKARVISQQSLERSYHIFYQIMSGSVPGVKDICLLTDNIYDYHIVSQ 314

Zfish   328 GHVQVQNQQDDEMLEETLEAMEVLGFNEEERIGMFKICSTVLQLGNIEFKAEKNQEQASMPDNTA 392
            |.|.|.:..|.|....|.:|.::|||.::|:..:::|.:.|:.:|.::||....:|||.......
  Fly   315 GKVTVASIDDAEEFSLTDQAFDILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEE 379

Zfish   393 AQKVCHLQGINVTDFTKAMLTPKIKVGRELVQKAQTKEQADFAVEALAKAMYDRLFRWILGRVNK 457
            ..:|..|.|.:..:..|.:|.|:||||.|.|.:.:..:|...::.||.|.::||||:|::.:.|:
  Fly   380 GGRVSKLFGCDTAELYKNLLKPRIKVGNEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNE 444

Zfish   458 ALDKTKRQGASFIGILDIAGFEIFEDNSFEQLCINYTNEKLQQLFNHTMFILEQEEYKKEGIEWS 522
            .|| |:::...|||:||||||||||.|.|||||||:|||||||.|||.||:|||||||:|||:|:
  Fly   445 TLD-TQQKRQHFIGVLDIAGFEIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWA 508

Zfish   523 FIDFGLDLQPCIELIERPNNPPGILALLDEECWFPKATDVSFVEKLTNTH-SSHCKFSKPKNLK- 585
            |||||:||..||:|||:   |.|||::|:||..||||||.:|.||||||| .....|.|||..| 
  Fly   509 FIDFGMDLLACIDLIEK---PMGILSILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKP 570

Zfish   586 --EKTFFTVQHYAGKVDYNAMSWLTKNMDPLNDNVTALLSNSSSAFIQDIWKDVDRVVGLETMAK 648
              :...|.:.||||.|.||...||.||.|||||.|......|.:..:.:|:.|         .|.
  Fly   571 GQQAAHFAIAHYAGCVSYNITGWLEKNKDPLNDTVVDQFKKSQNKLLIEIFAD---------HAG 626

Zfish   649 MAKSDSSAPAASKSKKGMFRTVGQLYKESLGKLMTTLHNTQPNFVRCIIPNHEKRAGKIDAHLVL 713
            .:.....|......|.|.|.||...|||.|..|||||.:|||:||||||||..|:.|.:|||||:
  Fly   627 QSGGGEQAKGGRGKKGGGFATVSSAYKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVM 691

Zfish   714 DQLSCNGVLEGIRICRQGFPNRIVFHEFRQRYEVLAAGSIPK---GFMDGKQSCTLMIKHLDLDP 775
            .||:||||||||||||:|||||:::.:|:.||:::.    ||   |....|::..::||.:||..
  Fly   692 HQLTCNGVLEGIRICRKGFPNRMMYPDFKMRYKIMC----PKLLQGVEKDKKATEIIIKFIDLPE 752

Zfish   776 NLYRIGLSKIFFRTGVLAQLEEERDLKLTDIIIAFQAQARGFLGRKAFSNKQKQLTAMKVLQRNC 840
            :.||:|.:|:|||.|||.|:||.||.:|..|:...||.|||:|.||.|...|:|..|:||:|||.
  Fly   753 DQYRLGNTKVFFRAGVLGQMEEFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNL 817

Zfish   841 AVYLTLRNWQWWRLFTKVKPLLQVTRQEEEMNQIEEELQKAKEIAQKSETELKEITQKHDQVVEE 905
            ..||.||.|.|::|:.||||||.|:|.|:|:.::||:.:||:|:........||:...:.:::.|
  Fly   818 RKYLQLRTWPWYKLWQKVKPLLNVSRIEDEIARLEEKAKKAEELHAAEVKVRKELEALNAKLLAE 882

Zfish   906 RNKLQAKLQEEAELYAESEEVRIRLETKKQELEEVLHEMEARL-EEEEERSQAFQQEKGNLQQKL 969
            :..|...|..|.....:.:|...:|..:|.:||..|.:::.|| :||:.|:|.|||:| ...|::
  Fly   883 KTALLDSLSGEKGALQDYQERNAKLTAQKNDLENQLRDIQERLTQEEDARNQLFQQKK-KADQEI 946

Zfish   970 KELENHLAEQDATRQKLQLESGAADGKIKKLEEDVLIMEDQKNKLQKEKQQLEERLADFSSNLAE 1034
            ..|:..:.:.:...||.:.:....|.:|:.|.:::...::..|||.|||:...|........|..
  Fly   947 SGLKKDIEDLELNVQKAEQDKATKDHQIRNLNDEIAHQDELINKLNKEKKMQGETNQKTGEELQA 1011

Zfish  1035 EEEKSKNLTKLKAKHESMISDLEVRMKKEEKSRQDVEKAKRKLETEHSDLQEQMKNLQTLIAELK 1099
            .|:|..:|.|:|||.|..:.:||..:::|:|.|.||||:|||:|.:....||.:.:|:....||:
  Fly  1012 AEDKINHLNKVKAKLEQTLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEAVADLERNKKELE 1076

Zfish  1100 TQQARSEMEIQELQASVEAESTQKSNALKKIHEMEGLLSELQDELEAEQGAGRKSEKARKELEEE 1164
            ....|.:.|:..:.|.:|.|........::|.|::..:.||::|:|||:.|..|:||.|.:|..|
  Fly  1077 QTIQRKDKELSSITAKLEDEQVVVLKHQRQIKELQARIEELEEEVEAERQARAKAEKQRADLARE 1141

Zfish  1165 LSALRTELEDSLDTTAVQQELRAKREQEVAMLKKLIEDEGRSHEAQVHELKQKHAQAVDELSQQL 1229
            |..|...||::...|:.|.||..|||.|::.|::.:|:....||:.:..|::||..||.|:::|:
  Fly  1142 LEELGERLEEAGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQV 1206

Zfish  1230 DQSKRAKATLEKAKQALEKEVGDLNGNLRSLGNAKQDLEQKKKKVETQLADLQTRFNESERKREE 1294
            ||..:.||..||.|.....::.||...:..:.|.|...|:..|:::..|.::|::.:|:.|...:
  Fly  1207 DQLNKLKAKAEKEKNEYYGQLNDLRAGVDHITNEKAAQEKIAKQLQHTLNEVQSKLDETNRTLND 1271

Zfish  1295 LGDAVSKLNTEYNNVNSILNEAESKNIKLSKDVVSLNSQLQDAQELLAEETRQKLNFSTRLRQME 1359
            ...:..||:.|.:::...|.||||:..:|||..:||.:||:|.:.|..||:|::.....:.|.:|
  Fly  1272 FDASKKKLSIENSDLLRQLEEAESQVSQLSKIKISLTTQLEDTKRLADEESRERATLLGKFRNLE 1336

Zfish  1360 DERNGLLEQIDEETEARRNVERHVSSLNTQLSEAKKRLDEYSSN----FQMLEESKKRLQRDLEA 1420
            .:.:.|.||::||.|.:.:::|.:|..|   :||:....:|.|:    .:.|||:|::||    |
  Fly  1337 HDLDNLREQVEEEAEGKADLQRQLSKAN---AEAQVWRSKYESDGVARSEELEEAKRKLQ----A 1394

Zfish  1421 TKGELEEKTASYDKS----EKTKNHLQQELDDVLLDLDNQRQLVSNMEKKQRKFDQMLADEKTLS 1481
            ...|.||...|.::.    ||||..|..|::|:.|::|....:.:..||||:.||:::.:.|...
  Fly  1395 RLAEAEETIESLNQKCIGLEKTKQRLSTEVEDLQLEVDRANAIANAAEKKQKAFDKIIGEWKLKV 1459

Zfish  1482 SKYSQERDCAEAEAREKETKCLALTRALEECQGSLRELEKLNKTLRTDMEDLIS--SKDNKNAHE 1544
            ...:.|.|.::.|.|...|:...|..|.||.|..|..:.:.||.|..:::||:.  .:..:|.||
  Fly  1460 DDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHE 1524

Zfish  1545 LEKTKRALEAQVEEMTIQMEELEDELQAAEDAKLHLEVNMQALKVQIQRDIQGREEQSEEKRKQL 1609
            :||.::.|||:.:|:...:||.|..|:..|:..|..::.:..::.:|.|.||.:||:.|..||..
  Fly  1525 IEKARKRLEAEKDELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNH 1589

Zfish  1610 LKQVRELEAELEDEQKMRTSLAAAKKKLEGDLQDLEDQVDVNSRARDEAVKQLRKIQTQMKDYQR 1674
            .:.:..::|.||.|.|.:......|||||.|:.:||..:|..::|..||.|.:::.|.|:||.|.
  Fly  1590 QRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANAEAQKNIKRYQQQLKDIQT 1654

Zfish  1675 ELEDARASHKEVLSDARE----SERKARAMEAEILHLHEELASAEKARKHAERERDEIAGEMASG 1735
            .||:.:.:.    .||||    |||:|.|::.|:......|..|::.|:.||:|..:...::...
  Fly  1655 ALEEEQRAR----DDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELADAHEQLNEV 1715

Zfish  1736 SFGKSGTSDEKRRLESKIQHLEEELDDEQATTETLNERLRRSVQEVDQLTNELHTERSNAQRMES 1800
            |...:..|..||:|||::|.|..:||:.....:...|:.::::.:..:|.:||..|:.:||..|.
  Fly  1716 SAQNASISAAKRKLESELQTLHSDLDELLNEAKNSEEKAKKAMVDAARLADELRAEQDHAQTQEK 1780

Zfish  1801 GWQQMERQNKELRAKLLEMEGQVKSKQRSTVAALESKLQQTEDQLDHESRERQAIAKAMRQKDKK 1865
            ..:.:|:|.|||:.:|.|.|.......:..:..||.::::.|::||.|.|......|.:|:.:::
  Fly  1781 LRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERR 1845

Zfish  1866 LKELMNQVEDERKQMEQYKDQAEKANLRARQLKMQMEESDEESQRATAARRKLQKELNEAIEAND 1930
            :|||..|.|::||..|:.:|..:|...:.:..|.|:||::|.:....|..||.|:||.||.|..|
  Fly  1846 VKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKAQQELEEAEERAD 1910

Zfish  1931 ALSREVSSLRSKLRRGSDSSFSTPLRRS 1958
            ...:.:|..|:|.|.||....::|..|:
  Fly  1911 LAEQAISKFRAKGRAGSVGRGASPAPRA 1938

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
myh11bXP_017210292.1 Myosin_N 33..70 CDD:280832 13/36 (36%)
Myosin_head 85..788 CDD:278492 348/710 (49%)
MYSc_class_II 97..788 CDD:276951 341/698 (49%)
Myosin_tail_1 865..1943 CDD:279860 337/1092 (31%)
FAM76 <1020..1099 CDD:292665 27/78 (35%)
BAR <1156..>1305 CDD:299863 46/148 (31%)
RILP-like <1760..1872 CDD:304877 30/111 (27%)
COG7 1824..>1943 CDD:287200 36/118 (31%)
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832 13/36 (36%)
MYSc 81..777 CDD:214580 362/729 (50%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 341/698 (49%)
Myosin_tail_1 842..1897 CDD:279860 326/1066 (31%)
V_Alix_like 1557..1877 CDD:187408 97/323 (30%)
ATP-synt_B <1671..1771 CDD:304375 27/99 (27%)
TMPIT 1739..>1825 CDD:285135 21/85 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D47111at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100110
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X58
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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