DRSC/TRiP Functional Genomics Resources

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Protein Alignment rnf145a and rnf145

DIOPT Version :10

Sequence 1:XP_005157379.1 Gene:rnf145a / 565986 ZFINID:ZDB-GENE-111012-3 Length:649 Species:Danio rerio
Sequence 2:NP_001072260.1 Gene:rnf145 / 779713 XenbaseID:XB-GENE-979193 Length:695 Species:Xenopus tropicalis


Alignment Length:656 Identity:534/656 - (81%)
Similarity:580/656 - (88%) Gaps:18/656 - (2%)


- Green bases have known domain annotations that are detailed below.


Zfish     1 MAVKERVEAVLNVGLRVPSIMLLEVLYRWDVSSFFQKIQRSSLNNNPLFQYKYLALYLHYVGYIL 65
            |..||::||:|||.|||||||||:|||||||||||::|||||||||||||||||||.:|||||||
 Frog     1 MGAKEKLEAMLNVALRVPSIMLLDVLYRWDVSSFFKQIQRSSLNNNPLFQYKYLALNMHYVGYIL 65

Zfish    66 SLVLLTLPRQHLVQLYLYVLTALLLFAGHQISRDYVRSELESGYEGPLYLEPLSINRFTTALLCQ 130
            |:||||||||||.:||||.:.||||:|||||||||||||||||||||:::||||:|||.|||:.|
 Frog    66 SVVLLTLPRQHLAKLYLYFVAALLLYAGHQISRDYVRSELESGYEGPMHIEPLSMNRFITALVGQ 130

Zfish   131 LVVCTLCSCVMQTKRIWLFSAHLLPLVARLCLVPLETIVFVNRFAMIFTGLEVIYFLASNLLVPF 195
            |||||||||||:||:|||||||:|||:|||||||:||||.:|:||||||||||:|||||||||||
 Frog   131 LVVCTLCSCVMKTKQIWLFSAHMLPLLARLCLVPIETIVVINKFAMIFTGLEVLYFLASNLLVPF 195

Zfish   196 NLAKTAYRELAQVVEVYGLLALGMSLWNQLVLPVLFMCFWLVLFALQIYTYFSTRDQPTSRERLL 260
            ||||:||||||||||||||||||||||||||:|||||.|||||||||||||||||||||||||||
 Frog   196 NLAKSAYRELAQVVEVYGLLALGMSLWNQLVVPVLFMVFWLVLFALQIYTYFSTRDQPTSRERLL 260

Zfish   261 FLFLTSIAECCCTPYSLLGLVFTVSFVALGVLTLCKFYLQGYRAFMNDNTMHRGMTEGITLLILA 325
            |||||||||||.||||||||||||||||||||||||||||||||||||..|:||||||:||||||
 Frog   261 FLFLTSIAECCSTPYSLLGLVFTVSFVALGVLTLCKFYLQGYRAFMNDPAMNRGMTEGVTLLILA 325

Zfish   326 VQTGLIELQVIHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFLL 390
            ||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   326 VQTGLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFLL 390

Zfish   391 VFPAYMSYMICQFFHMDFWLLIIISSSILTSLQVLGTLLIYVLFMVEELRKAPVENMDDVIYWVN 455
            |||:||:|||||||||||||||||||||||||||||||.||||||:||.||.||||||||||:||
 Frog   391 VFPSYMAYMICQFFHMDFWLLIIISSSILTSLQVLGTLFIYVLFMIEEFRKEPVENMDDVIYYVN 455

Zfish   456 GTYRLLEFLVALCVVAYGVSETVFGEWTVMGSTIVLIHSYYNVWLRAQLGWQSFLLRRDAVNKIK 520
            ||||||||||||||||||||||||||||||||.|:.|||||||||||||||:|||||||||||||
 Frog   456 GTYRLLEFLVALCVVAYGVSETVFGEWTVMGSMIIFIHSYYNVWLRAQLGWKSFLLRRDAVNKIK 520

Zfish   521 SLPTASLQQLQQHNDICSICYQDMTSAVITPCSHLFHAGCLKKWLYVQETCPLCHNQLKGSSQ-- 583
            |||.|:.:||:|||||||||||||.|||||||||.||.|||||||||||||||||.|||..||  
 Frog   521 SLPVATKEQLEQHNDICSICYQDMNSAVITPCSHFFHPGCLKKWLYVQETCPLCHCQLKSLSQQA 585

Zfish   584 ---LGSSSQDV-------PPQDTPAQPEEDQDPSEPADSESNLQ-----DLRQDDSSTRAPASEL 633
               .|||:..|       ||....::.|...:|.....:.|.|:     |::. ..|......||
 Frog   586 TGESGSSTNPVSEQSATNPPLGPVSRAEVTTEPLAAVPTRSALEQEPTMDIKV-SGSVEKRIGEL 649

Zfish   634 RARLKQ 639
            .|...|
 Frog   650 EAHFSQ 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnf145aXP_005157379.1 TRC8_N 8..506 CDD:463960 448/497 (90%)
rad18 523..>648 CDD:273165 66/134 (49%)
RING_Ubox 533..575 CDD:473075 38/41 (93%)
rnf145NP_001072260.1 TRC8_N 8..506 CDD:463960 448/497 (90%)
RING-H2_RNF145 533..575 CDD:319598 38/41 (93%)
rad18 537..>651 CDD:273165 55/114 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 585..610 6/24 (25%)

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