Protein Alignment rnf145a and hrd1

DIOPT Version :9

• Sequence 1: XP_005157379.1
• Gene: rnf145a / 565986
• ZFINID: ZDB-GENE-111012-3
• Length: 649
• Species: Danio rerio
• Sequence 2: NP_596376.1
• Gene: hrd1 / 2539900
• PomBaseID: SPBC17D11.02c
• Length: 677
• Species: Schizosaccharomyces pombe
• Alignment Length: 463
• Identity: 99/463 - (21%)
• Similarity: 172/463 - (37%)
• Gaps: 174/463 - (37%)

Zfish   229 VLFMCFWLVLFALQIYTYFSTRDQPTSRERLLFLFLTSIAECCCTPYSLLGLVF-TVSFVALGV- 291
            :|::...||||.|.:               ||.|:.::      ..||...::. :...:.:|:
pombe     4 ILYVLASLVLFGLSV---------------LLSLYSSA------NVYSATVMISQSPVHITIGLN 47

Zfish   292 LTLCKFYLQGYRAFMNDNTMHRGMTEGITLLILAVQTGLIELQVIHRAFLLSIILFIVVASILQS 356
            :.||.|       |...|.:.       |||..::||  .||::::..|.:::
pombe    48 VCLCLF-------FAIANALK-------TLLFGSLQT--FELELLYEQFWITL------------ 84

Zfish   357 MLEIADPIVLALGASRDKSLWKHFRAVSLCLFLLVFPAYMSYMICQF-------------FHM-- 406
                 ..|:||:...|:......|..:|..:|..||     :.||.|             ||:
pombe    85 -----TEIMLAITVFREAISISFFMLLSTLMFARVF-----HSICSFRTERLQIQLTDQRFHIFS 139

Zfish   407 ----DFWLLIIISSSIL----TSLQVLGTLLIYVLFMVE----------ELRKAPV-----ENMD 448
                .:::|.|:.:|::    || :.||.....:||:.|          |..|..:     .::|
pombe   140 RLTCAYFVLSILDASLIYLCFTS-EHLGDKSTRMLFVCEFSVLLLNLTIEASKLCIYLYEARHLD 203

Zfish   449 DVIYW-VNGTYRLLEFLVALC-----VVAYG---------VSETVFGEWTVMGSTIVLIHSYYNV 498
            .|  | ...||.   |.:.:|     ::||.         ||..::       |...:...:|::
pombe   204 QV--WDEKSTYL---FRLEVCRDGLRLLAYSLLFMYQFPYVSVPIY-------SIRQMYTCFYSL 256

Zfish   499 WLRAQLGWQSFLLRRDAVNKIKSL-PTASLQQLQQHNDICSICYQ-------------------- 542
            :.|.    :.....|.|...:.:: |||:.:||...:..|:||.:
pombe   257 FRRI----REHARFRQATRDMNAMYPTATEEQLTNSDRTCTICREEMFHPDHPPENTDEMEPLPR 317

Zfish   543 --DMTSAVITPCSHLFHAGCLKKWLYVQETCPLCHNQLKGSSQLGSSSQDVP------------- 592
              |||...: ||.|:.|..||:.||..|:|||:|...:.|:.   ||...:|
pombe   318 GLDMTPKRL-PCGHILHFHCLRNWLERQQTCPICRRSVIGNQ---SSPTGIPASPNVRATQIATQ 378

Zfish   593 ---PQDTP 597
               ||:||
pombe   379 VPNPQNTP 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rnf145a	XP_005157379.1	TRC8_N	8..506	CDD:290425	65/331 (20%)
		zf-RING_2	535..575	CDD:290367	18/61 (30%)
hrd1	NP_596376.1	HRD1	1..514	CDD:227568	99/463 (21%)
		zf-RING_2	291..351	CDD:290367	18/60 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5243
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	3	2.770