DRSC/TRiP Functional Genomics Resources

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Protein Alignment hpgd and Adhr

DIOPT Version :9

Sequence 1:NP_001313470.1 Gene:hpgd / 565975 ZFINID:ZDB-GENE-080728-2 Length:261 Species:Danio rerio
Sequence 2:NP_001027272.1 Gene:Adhr / 3772432 FlyBaseID:FBgn0000056 Length:272 Species:Drosophila melanogaster


Alignment Length:264 Identity:72/264 - (27%)
Similarity:117/264 - (44%) Gaps:25/264 - (9%)


- Green bases have known domain annotations that are detailed below.


Zfish     3 LHGKTALVTGGAQGIGRAVVEELL-QNGAKVALVDLNQSVGEECKSDLDDQFGEDNCIFIQCDVT 66
            |.||.........||.....:.|: :|.||:|:  |..:...:..:.|..........|...|||
  Fly     4 LTGKHVCYVADCGGIALETSKVLMTKNIAKLAI--LQSTENPQAIAQLQSIKPSTQIFFWTYDVT 66

Zfish    67 DG-EKLGDAFRNTVDRFGRLDIVINNAGINNEKNWEKTIEVNLTSVIKGTYLALEHMSKEYGKQG 130
            .. |.:...|...:.:...:|::||.|.:.:|.|.:.||..|||.::......|.:|.::.|..|
  Fly    67 MAREDMKKYFDEVMVQMDYIDVLINGATLCDENNIDATINTNLTGMMNTVATVLPYMDRKMGGTG 131

Zfish   131 GAIINVSSMAAFLHSPHQPVYTATKYGVIGFSRAMADASEQGNYGVRINALC----PAFVDTQLL 191
            |.|:||:|:.....||....|:|:|:|||||:|::||.......||.:.|:|    ..|||.:| 
  Fly   132 GLIVNVTSVIGLDPSPVFCAYSASKFGVIGFTRSLADPLYYSQNGVAVMAVCCGPTRVFVDREL- 195

Zfish   192 QTVEHEETMGKFVKYKDDFKQRMDKYGVLKPSLIAEGMLRLITDESLNGAVMKITCSKG----IH 252
                     ..|::|...|..|:.:......|:..:.::..| :.|.||.:.  ...||    :.
  Fly   196 ---------KAFLEYGQSFADRLRRAPCQSTSVCGQNIVNAI-ERSENGQIW--IADKGGLELVK 248

Zfish   253 FHTY 256
            .|.|
  Fly   249 LHWY 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hpgdNP_001313470.1 ADH_SDR_c_like 6..254 CDD:187584 68/257 (26%)
adh_short 6..198 CDD:278532 57/197 (29%)
AdhrNP_001027272.1 ADH_SDR_c_like 7..248 CDD:187584 68/255 (27%)
adh_short 7..195 CDD:278532 56/189 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4169
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 136 1.000 Inparanoid score I4534
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6395
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2961
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.820

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