DRSC/TRiP Functional Genomics Resources

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Protein Alignment kcng3 and Shawl

DIOPT Version :9

Sequence 1:XP_021336001.1 Gene:kcng3 / 565643 ZFINID:ZDB-GENE-111111-9 Length:422 Species:Danio rerio
Sequence 2:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster


Alignment Length:533 Identity:141/533 - (26%)
Similarity:217/533 - (40%) Gaps:153/533 - (28%)


- Green bases have known domain annotations that are detailed below.


Zfish     4 GKNICILNVGGTKYAFTREVIKDFPLRRVSRLHSCSSEKEVLEVCDDYDRERNEFFFDRHSEAFV 68
            |:|..||||.|.:|...:..:|..|..|:|||         .|...:||...||:|||||...|.
  Fly     3 GENRIILNVSGIRYETYKATLKKIPATRLSRL---------TEALANYDPVLNEYFFDRHPGVFT 58

Zfish    69 FIMLYVRSGKLRFVPQMCELSFYNEMIYWGLESSHLEFCCQRRLEDRMSDTYTYFSEDDMKAEVE 133
            .|:.|.|:|||.:...:|...|..|:.:|||:|:.:|.||............|....|.:..|.|
  Fly    59 QILNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENE 123

Zfish   134 SRGEEEQVSRF-----APDRGSARWLERMR----RTFEEPASSIAAQILASVSVVFVIMSMVILC 189
             :..|||::|.     |...|.....:|::    ..|:||:||..|:|:|.:||.|:.:|::..|
  Fly   124 -KPTEEQIARLFGFEEALSNGELNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFC 187

Zfish   190 ASTLPDW---------------------------DTAKNNTVEEHRI------------------ 209
            ..|.|.:                           :..:.:...:|.|                  
  Fly   188 LKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTS 252

Zfish   210 ----------------------------------------------------------------- 209
                                                                             
  Fly   253 YSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAF 317

Zfish   210 --IEAVCIGWFTAECIVRFIVSRDKCEFVRRPLNIIDLLAITPYYVSVAMTALTGENPQLQRAG- 271
              :|.||..||..|.|:|.|||.:..:|::.|:||||..|...:|..|           :||.| 
  Fly   318 FYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFYTDV-----------MQRMGE 371

Zfish   272 -----VTLRVLRMMRIFWLIKLARHFLGLQTLGLTLRRCYREMVMLLVFVCVAMAIFSALAQLLE 331
                 ....::|:||:|   ||.||..||:.|..|.:...:|:.:|:.|:.:.:..|::||...|
  Fly   372 YTGLLEAFSIVRIMRLF---KLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAYYAE 433

Zfish   332 HGLDLETSNEDYASIPASCWWVIISMTTVGYGDMYPITIPGRVLGGVCVVSGIVLLALPITFIYH 396
            ...|  ..:..:.|||...||.|::||||||||:.|.|.||..:|.:|.::|::.:|||:..|..
  Fly   434 KLQD--NPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIVS 496

Zfish   397 SFVQCYHELKFRS 409
            :|...|...:.||
  Fly   497 NFSMFYSHTQARS 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kcng3XP_021336001.1 BTB 9..107 CDD:321966 37/97 (38%)
Ion_trans 170..406 CDD:306908 82/353 (23%)
ShawlNP_001097131.2 BTB 7..99 CDD:197585 38/100 (38%)
BTB_2 7..97 CDD:280393 37/98 (38%)
Ion_trans 307..506 CDD:278921 70/214 (33%)
Ion_trans_2 <449..499 CDD:285168 22/49 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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