Sequence 1: | XP_021325650.1 | Gene: | hspg2 / 565429 | ZFINID: | ZDB-GENE-080807-4 | Length: | 3701 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001027038.3 | Gene: | trol / 45320 | FlyBaseID: | FBgn0284408 | Length: | 4479 | Species: | Drosophila melanogaster |
Alignment Length: | 3812 | Identity: | 1022/3812 - (26%) |
---|---|---|---|
Similarity: | 1523/3812 - (39%) | Gaps: | 963/3812 - (25%) |
- Green bases have known domain annotations that are detailed below.
Zfish 214 RECTSNEFSCQDGLACIPREYVCDKRPDCNDLSDEIDCGVGVAPLRPTQ---PTPP--------- 266
Zfish 267 -------------------RP--RP-PPG--------------------------------PG-- 275
Zfish 276 -------------------PCRADQATCQNGQCISREYLCDGESDCTDGSDESRCGTPSPCEPNE 321
Zfish 322 FKCQNGRCALKLWRCDGDNDCQDNSDEMNCPTKRPGAACAPEQFVCLSDRKCIPASYQCDEEPDC 386
Zfish 387 ADRSDEFGCAPPTVTVSPEESITASRGDTVTFTCSAIGVPVPIITWRLNWGHIPANNRITMISEN 451
Zfish 452 GQGTLTIRDVKEGDQGAYTCEAINAKGLVFAIPDGVLSLSQKPNPVVSSSPFILAGNCRDGHFSV 516
Zfish 517 ----GGHCMPCFCFGITKKCQSTGRYR------------------------------NQITLRFT 547
Zfish 548 EEEDFKGVNVSFPSRPGLPQPLSSTQMLINPETEEFQLVDLSRRFLDQDSFWSLPRQFLGNKVDS 612
Zfish 613 YGGYLKFKVSYSLQRGGSEPKVRPDVVLTGSGQKFIYRRGEPTFPDTFNSREIRFTEENWEHSNG 677
Zfish 678 RAVTRDDLMMTLANLESIHIRTIY-DNRMASVGLSDISMDTTTKEFSQHGNPREVEECRCPAGYS 741
Zfish 742 GLSCESCSPGFERVP-GPYLGICAGCNCNGHASACDPVSGHCLSCQHKTEGAQCEKCKPGFFGDP 805
Zfish 806 SRGQYDDCKPCPCPYTETSRRFSDTCFLDHDNQATCDACREGYTGRRCEKCAPGYVGNPLQPNGK 870
Zfish 871 C--IPAASPISKCDNRGTINPISK-PCYCKSNVAGALCDECKTGAFHLTADNPEGCLQCFCMGVT 932
Zfish 933 KQCASSTWSRDQV-----RGGVNGQLFTLSN-------------AANTRTIS--EGITQRGSTEV 977
Zfish 978 VYRSFTNIHNDIFYWVLPQNFRGDKVTAYGGELKYRVRYEPHARS-MVIDGQPDVVLQ-GSGIFL 1040
Zfish 1041 EHYSQIKPLPRVPATITVTFRESAWRRADGQPCTREHLLMALADINVFMIRATYADNMAETSLSN 1105
Zfish 1106 IQMDIAVPHSTGNERAMEVEECACPQGYSGPSCQDCDVGYTRTP--GLYLGTCEKCECHGHASSC 1168
Zfish 1169 DSETGDCLNCLHNTIGRRCENCISGYYGNPKTGDPQACRPCPCLGQTSNQPSSCYLGSDGQPVCE 1233
Zfish 1234 CPAGYTGRRCERCAPGYIGNPQLGQRCTPGSNNGDCYR-CDQSGSEGCSGTGVCRCKMNVEGPTC 1297
Zfish 1298 SSCKQGTFHLSPANKDGCLSCFCMGVTQQCTSSRHYRDVVSTMFSPGNYQGFALVNRQRTNRIDN 1362
Zfish 1363 GFSVELSTEGTQLSYTNFNYLGQEPHYWQLPKAYQGDKKASSARTRRANQYPADEARKLDDEIWE 1427
Zfish 1428 IITNFSNGQSSFPFSSSSQSSHSSSFEAQNSLSLSSVRDPSFHSGLTSPLKASESHSSDPAHSSH 1492
Zfish 1493 PDSTQQVEQEKNIIGVVRGPRPVPSNKYVLVYNGFSLHPDDVLFWQLPEPFKGEKVGAYGGKLKY 1557
Zfish 1558 TI---SYVPGPRGSPIEDADVQIIGNDITLVARQIWQRGHGARESQDFEI-VFREEHWQRPD--- 1615
Zfish 1616 GMPATREHLMMVLADLDDILIRASYHTEMRSSSISGVHMDVAVPEYT-SLAQALEVEQCQCPPGY 1679
Zfish 1680 SGLSCQDCASGYTRTGGGLYLGHCEPCECNGHSDTCHPETGICTNCQHNTKGELCEQCVDGFFGD 1744
Zfish 1745 PTAGTPEDCQPCACPGTDPENQFSRTCESLGNGGYQCTACQPGYLGQYCERCAPGYVGNPQARVP 1809
Zfish 1810 CRSDAAFLVVKVYPERVQVAQGLPVTLRCQVSGSPPHYFQWSREDGRPISSSAERRRQGEELHFP 1874
Zfish 1875 GIQSNDAGVYICTCRDQRSSNRSKAEIVVATLPSKPIEVFIEEPKAQSVRVGSTVSFICTAKSKL 1939
Zfish 1940 PAYTLVWTR--------KGNGKLPNRAMDFNGILTIQNVQPEDAGIYVCTGSNMLGMDEGSAV-- 1994
Zfish 1995 --LYVPEASQSQMFYTAYEMFEGHRKPAEGVQPVATLSPPVQTVKEGDVAQFRCTVTGNPTPAVE 2057
Zfish 2058 WIGGSGKRISSKAVIRNGQLTISSVDRSDEGEYICKALNTHGEHTARGVLHVQSTGQPNGLP--- 2119
Zfish 2120 HVQVSPQRVEIYEGETLRLYCRAIGSPTPSLKWNKRGGSLPPQAIPSHGFHQFKSNSLDVLQRRI 2184
Zfish 2185 EELQARMDRTDIGTLVVPNIRLSDAGTYLCVG------TNAAGSSEAHID-----------VSVT 2232
Zfish 2233 KGENILSGVIIQPPSASVIEGEALDLNCLVPGTSTGSVKWSRAGGLLSSNHQVLETRLRILRASA 2297
Zfish 2298 DDTGDYICTVENGPSPQKATVSVSV-------TSSASLGLQTPIISIEPHSAVVKQGESASFRCK 2355
Zfish 2356 VHNGAQPVRLEWKLTNNLPLPDNVKVGPDSSIMTVTNAQAKNQGTYRCVASNLYGMTHSIVSLIV 2420
Zfish 2421 RESPKAVVTPAG-PVRVRVGDPINLECQAAGEPRPSVRWHRLDNNRKTMLSSTVPVDSSAIIQVL 2484
Zfish 2485 VARPEDSGTYVCSAQNNQGTTETRVEVFVE------GGP-----------QVPTVPRASVREP-- 2530
Zfish 2531 --MIIVVEGSTATLHCDAHGFPKPTITWFK-ERSSLPWRHKIVDNSLILPNVGRQDSGQYVCNAT 2592
Zfish 2593 NHLGTSEVTIMLEVDTPP-----YATSLPNDVSVRVGEVIRLQCLAHGTPPLRYEW-TKINGSLP 2651
Zfish 2652 STAQLQGGDLQINLAKENDAGTYRCVASNKVGKSEALAKVSVRSSLSVKVSPQVEVK--ALGSAV 2714
Zfish 2715 EFTCA--------AKGGLQIEWLKEG-GVLPPNHHIKDGILRIENLEQSNEGIYTCRVTSQFEHA 2770
Zfish 2771 QDSAKLLIQALPKVKINVRT--------------------------------------------- 2790
Zfish 2791 -------------SVQTVMVGNSVEFECHAIGDPEPTVRWSKV-GAPLPDHVEIRGNILRIDQVF 2841
Zfish 2842 ESDSGQYRCTATNDVGSEH-SHVVLNIQSLPQIAALPESKEV--TIGSDAVLPCIASGYPVPTIT 2903
Zfish 2904 WSKVENDLPPKCRQDGHALTVPVVTESDAGTYVCTAANKQGKVEAFTRLNVHERVMPYFTQEPLS 2968
Zfish 2969 YLTLPTIKNSYKAFSIKITFRPDNVDGLILYAGMIIYNGQKKTTGADFISFGLLGGRPEFRFDVG 3033
Zfish 3034 SGMATIRYPTPIKLGEFHTVHLYRNQTQGSLVVDGQAPVNGTSQGKFKGLDLNEELFVGGYPNYS 3098
Zfish 3099 ML-AKTAGLKTGFVGCIKQLIIQGDEVIFKDLDKSSTGVSNCPTCKDRPCQNDGTC-EDSVASLY 3161
Zfish 3162 KCTCKRGFTGSNCQHHSSLHCHTEACGPDATCINRPSGLGYDCRCHLGKSGNKCMDGTLIT--TP 3224
Zfish 3225 LFDGEDSYIAY--PPLTNIHNDLRIEMEFKPMD-PDGLMFFSGGKKMKVEDFVAVSMVNGHVEFR 3286
Zfish 3287 YELGT--GQAVLRSQEPVSLDQWHRVVAERLNKDGSLTVDHAKEITRSSPGKAQGLNIHTPMYLG 3349
Zfish 3350 GVPSMDI-LPKPANVSMLFDGCIGEVFINGKKVDLSYSFTESRAISQCND------DSPCDRRPC 3407
Zfish 3408 LHAGTCMATAEYEYQCF----CAEGYEGDRCEIVKESCRHSSQCQNGGSCVNNH----CVCPAGY 3464
Zfish 3465 SGRHCEKGQESSFSEAMWSLEGSGGNDSPIEYSAYFHDNGYLALPKPMFPRSAPDSPETIELEIN 3529
Zfish 3530 TASKDGLILWQGVESAGALNLHKKHANIKELGDQGKGKDFISLGLQNGHLVFSYQLGSGEAQIVS 3594
Zfish 3595 GE-PVNDRQWHKITAVRTGKHGYLQIDGGSVQRGQSQGKS-IMVNTKGNIYLGGAPDMQALTGGK 3657
Zfish 3658 YSSGMTGCVKNLSLMNARPGEQPARPIDLQVHAEEGINVERC 3699 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
hspg2 | XP_021325650.1 | SEA | 84..198 | CDD:321958 | |
LDLa | 216..251 | CDD:238060 | 14/34 (41%) | ||
LDLa | 277..311 | CDD:238060 | 18/33 (55%) | ||
LDLa | 317..351 | CDD:238060 | 20/33 (61%) | ||
LDLa | 360..395 | CDD:238060 | 17/34 (50%) | ||
Ig_Perlecan_like | 413..490 | CDD:143220 | 33/76 (43%) | ||
Laminin_B | 598..732 | CDD:306547 | 45/134 (34%) | ||
EGF_Lam | 766..814 | CDD:238012 | 10/47 (21%) | ||
EGF_Lam | 831..869 | CDD:238012 | 21/37 (57%) | ||
Laminin_EGF | 871..923 | CDD:278482 | 20/54 (37%) | ||
Laminin_B | 991..1125 | CDD:306547 | 56/135 (41%) | ||
Laminin_EGF | 1159..1206 | CDD:278482 | 22/46 (48%) | ||
EGF_Lam | 1208..1261 | CDD:238012 | 5/52 (10%) | ||
Laminin_EGF | 1272..1315 | CDD:278482 | 18/42 (43%) | ||
Laminin_B | 1536..1671 | CDD:306547 | 46/142 (32%) | ||
EGF_Lam | 1705..1754 | CDD:238012 | 0/48 (0%) | ||
EGF_Lam | 1755..1811 | CDD:238012 | 9/55 (16%) | ||
IG_like | 1823..1903 | CDD:214653 | 8/79 (10%) | ||
Ig_Perlecan_like | 1911..1996 | CDD:143231 | 21/96 (22%) | ||
I-set | 2025..2109 | CDD:254352 | 22/83 (27%) | ||
I-set | 2119..2231 | CDD:254352 | 25/131 (19%) | ||
I-set | 2241..2309 | CDD:333254 | 15/67 (22%) | ||
Ig_3 | 2333..2407 | CDD:316449 | 18/73 (25%) | ||
Ig_3 | 2427..2500 | CDD:316449 | 19/73 (26%) | ||
I-set | 2517..2606 | CDD:254352 | 21/104 (20%) | ||
I-set | 2610..2693 | CDD:333254 | 24/88 (27%) | ||
I-set | 2699..2778 | CDD:333254 | 17/89 (19%) | ||
I-set | 2785..2867 | CDD:254352 | 26/141 (18%) | ||
I-set | 2871..2954 | CDD:254352 | 27/84 (32%) | ||
LamG | 2961..3119 | CDD:238058 | 65/158 (41%) | ||
EGF_CA | <3146..3175 | CDD:238011 | 13/29 (45%) | ||
LamG | 3226..3377 | CDD:238058 | 41/156 (26%) | ||
EGF | 3402..3433 | CDD:306513 | 8/34 (24%) | ||
EGF_CA | 3441..3470 | CDD:238011 | 14/32 (44%) | ||
LamG | 3497..3671 | CDD:238058 | 44/175 (25%) | ||
trol | NP_001027038.3 | LDLa | 447..480 | CDD:238060 | |
LDLa | 532..564 | CDD:238060 | |||
LDLa | 571..606 | CDD:238060 | |||
LDLa | 616..650 | CDD:238060 | |||
LDLa | 704..739 | CDD:238060 | |||
LDLa | 813..847 | CDD:238060 | |||
LDLa | 852..887 | CDD:238060 | |||
LDLa | 902..936 | CDD:238060 | |||
LDLa | 956..990 | CDD:238060 | |||
LDLa | 997..1030 | CDD:238060 | |||
LDLa | 1033..1067 | CDD:238060 | |||
LDLa | 1072..1105 | CDD:238060 | |||
LDLa | 1133..1165 | CDD:238060 | |||
LDLa | 1182..1215 | CDD:238060 | |||
LDLa | 1221..1251 | CDD:238060 | |||
LDLa | 1252..1286 | CDD:238060 | |||
LDLa | 1292..1326 | CDD:238060 | 14/34 (41%) | ||
IG | 1344..1421 | CDD:214652 | 10/76 (13%) | ||
Ig | 1344..1405 | CDD:299845 | 8/60 (13%) | ||
LDLa | 1439..1473 | CDD:238060 | 18/33 (55%) | ||
LDLa | 1479..1513 | CDD:238060 | 20/33 (61%) | ||
LDLa | 1522..1556 | CDD:238060 | 17/34 (50%) | ||
IG_like | 1566..1649 | CDD:214653 | 34/84 (40%) | ||
Ig_Perlecan_D2_like | 1574..1649 | CDD:143220 | 33/76 (43%) | ||
Laminin_B | 1748..1864 | CDD:278481 | 44/120 (37%) | ||
EGF_Lam | 1935..1989 | CDD:238012 | 29/55 (53%) | ||
Laminin_B | 2113..2238 | CDD:278481 | 51/124 (41%) | ||
EGF_Lam | <2250..2276 | CDD:238012 | 13/25 (52%) | ||
EGF_Lam | 2284..2333 | CDD:238012 | 22/48 (46%) | ||
Laminin_EGF | <2369..2399 | CDD:278482 | 14/29 (48%) | ||
Laminin_B | 2465..2587 | CDD:278481 | 44/130 (34%) | ||
I-set | 2686..2772 | CDD:254352 | 21/96 (22%) | ||
Ig_2 | 2689..2771 | CDD:290606 | 20/92 (22%) | ||
Ig | 2779..2865 | CDD:299845 | 26/90 (29%) | ||
IG_like | 2798..2864 | CDD:214653 | 19/65 (29%) | ||
Ig | 2882..2965 | CDD:299845 | 22/107 (21%) | ||
IG_like | 2882..2950 | CDD:214653 | 20/92 (22%) | ||
Ig | 2977..3061 | CDD:299845 | 21/94 (22%) | ||
IG_like | 2984..3058 | CDD:214653 | 20/84 (24%) | ||
IG_like | 3074..3152 | CDD:214653 | 23/90 (26%) | ||
Ig | 3086..3153 | CDD:299845 | 16/68 (24%) | ||
I-set | 3155..3243 | CDD:254352 | 24/90 (27%) | ||
IGc2 | 3171..3233 | CDD:197706 | 18/64 (28%) | ||
IG | 3371..3447 | CDD:214652 | 23/77 (30%) | ||
IGc2 | 3377..3437 | CDD:197706 | 18/59 (31%) | ||
Ig | 3456..3534 | CDD:299845 | 17/82 (21%) | ||
IG | 3465..>3526 | CDD:214652 | 13/60 (22%) | ||
Ig | 3603..3665 | CDD:299845 | 21/61 (34%) | ||
IG | 3610..3683 | CDD:214652 | 25/72 (35%) | ||
IG | 3696..3762 | CDD:214652 | 22/65 (34%) | ||
Ig | 3704..3771 | CDD:299845 | 21/66 (32%) | ||
LamG | 3784..3929 | CDD:238058 | 61/151 (40%) | ||
EGF | 3952..3984 | CDD:278437 | 14/31 (45%) | ||
LamG | 4032..4185 | CDD:238058 | 41/157 (26%) | ||
Laminin_G_2 | 4315..4444 | CDD:280389 | 37/151 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170594619 | |
Domainoid | 1 | 1.000 | 111 | 1.000 | Domainoid score | I6201 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1247 | 1.000 | Inparanoid score | I170 |
OMA | 1 | 1.010 | - | - | QHG46672 | |
OrthoDB | 1 | 1.010 | - | - | D17288at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0006846 | |
OrthoInspector | 1 | 1.000 | - | - | oto40648 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107789 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X4935 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.810 |