Sequence 1: | XP_001920501.5 | Gene: | hmcn2 / 565032 | ZFINID: | ZDB-GENE-030131-9765 | Length: | 4212 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036705.1 | Gene: | side-VI / 4379854 | FlyBaseID: | FBgn0083950 | Length: | 1087 | Species: | Drosophila melanogaster |
Alignment Length: | 1246 | Identity: | 255/1246 - (20%) |
---|---|---|---|
Similarity: | 420/1246 - (33%) | Gaps: | 370/1246 - (29%) |
- Green bases have known domain annotations that are detailed below.
Zfish 2419 EARGVPPPTLSWLKDGQPLSLHRNLLLDGQETRFLLSDVGPSDAGLYSC-VASNQAGSSTKTFNL 2482
Zfish 2483 TVLEPPKITGSLSPEEQLIAVDS---------LLELECIA-TGLPPPTLSWLKDGRPIQDNMAII 2537
Zfish 2538 ERDG----QLLRINKVQVEDAGLYTCLASS-PAGEDGRNHWVRVQLPPTLLGSNDIRTVSVPAKG 2597
Zfish 2598 HLTLECQT-DSDPPPEIEWYKDNVKVQLGGRIQSIA-----SGQFLEIQDVRMHDSGQYSCVVTN 2656
Zfish 2657 ---------IAGSTSLFF--TVEILLPPVIREGSSLIIAHV--GQDAVLPCEVEGAPSS-SVMWR 2707
Zfish 2708 KDGGPVPLHNNRF-TLLSEGSLRISTVQLSDVGRYYCSVSNQAG-SDHRGMDLKVYVGPSISPGP 2770
Zfish 2771 FNV-TVVTGQRAVLSCESTGIPAPQ-VSWRRNGSPISVDQ-SSAYRLMSS-GSLVITSPTAE-DE 2830
Zfish 2831 GYFECTVTNEVGEERRVIEVILQVPPVIKDDVSSVTAVKMSPVVLPCHATGRPE-----PVISWN 2890
Zfish 2891 KNWMQL----GARGGSYRVLPTGALEILAATPSHAGKYTCSARNPVGVAYKHVTLTVQEPPEIRP 2951
Zfish 2952 MAEEVQVVLHHSVVLPCEVQGFPRPTITWQREGVPVATGHRLAVLS-NGALKFSRVTLGDAGTYQ 3015
Zfish 3016 CLAQNEAGTAL------AQTQLILQVPPVLSVPRLEYVVVLGQPVSLDCVADG---QPKPEVTWH 3071
Zfish 3072 RDRRPVVDSSHLRLFSN-GSLHITATQRGDAGIYTCSARNSVG-RASHDVRLILHTPPQIFVGQS 3134
Zfish 3135 EISVMQGLRVMLPCAAQGVPEPRMSWEKKGVSVSNMPGKFTLRESGGLIIERAEAGDAGLF---- 3195
Zfish 3196 -----------TCVATNTAGSARWD--------IRLTV--------------------------N 3215
Zfish 3216 MRPAFKELPGDVTL-----NKGQSLSLSCHAEGTPTPTITWTANNRPYTGASVD-------ETGR 3268
Zfish 3269 SSVIFDNVTVSDGGTYACIAENTVGLIRALSFVRVREPPVLRGEAHTSQTVIQGKSAMLDCAVSG 3333
Zfish 3334 DPVPSLRWHKDGQPLLGSLRFHPLRNGSLALYSAIIGDSGEYRCVAESEAGAAERTISLKVQVPG 3398
Zfish 3399 GYSNWEEWGPCSVTCGQGIQERIRF--------CNNPPPAYGGPLCEGPNVDSRKCQASLCPGES 3455
Zfish 3456 PRRARGSLIGMVNEKEFGVAYLEANIT--ENDLEGTSTLEAHVENIPPSVG-PLLRVLVSVFAPV 3517
Zfish 3518 YWTTVYQTQET 3528 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
hmcn2 | XP_001920501.5 | VWA_2 | 38..208 | CDD:290253 | |
IG | 441..512 | CDD:214652 | |||
Ig | 441..502 | CDD:299845 | |||
I-set | 516..603 | CDD:254352 | |||
Ig | 533..600 | CDD:143165 | |||
IG | 613..691 | CDD:214652 | |||
Ig | 624..690 | CDD:143165 | |||
IG | 710..784 | CDD:214652 | |||
Ig | 714..781 | CDD:143165 | |||
IG | 794..879 | CDD:214652 | |||
Ig | 794..879 | CDD:299845 | |||
I-set | 885..972 | CDD:254352 | |||
Ig | 904..972 | CDD:299845 | |||
IG_like | 982..1063 | CDD:214653 | |||
IGc2 | 989..1053 | CDD:197706 | |||
IG_like | 1083..1159 | CDD:214653 | |||
Ig | 1089..1156 | CDD:143165 | |||
I-set | 1163..1241 | CDD:254352 | |||
IGc2 | 1176..1231 | CDD:197706 | |||
Ig | 1244..1327 | CDD:299845 | |||
IG_like | 1258..1335 | CDD:214653 | |||
Ig | 1338..1430 | CDD:299845 | |||
I-set | 1344..1428 | CDD:254352 | |||
IG_like | 1441..1523 | CDD:214653 | |||
IGc2 | 1448..1513 | CDD:197706 | |||
IG_like | 1536..1616 | CDD:214653 | |||
IGc2 | 1545..1606 | CDD:197706 | |||
IG_like | 1638..1714 | CDD:214653 | |||
Ig | 1644..1711 | CDD:143165 | |||
IG_like | 1753..1830 | CDD:214653 | |||
Ig | 1760..1822 | CDD:143165 | |||
I-set | 1834..1918 | CDD:254352 | |||
Ig | 1851..1925 | CDD:299845 | |||
IG_like | 1937..2017 | CDD:214653 | |||
IGc2 | 1943..2007 | CDD:197706 | |||
IG_like | 2031..2110 | CDD:214653 | |||
IGc2 | 2039..2100 | CDD:197706 | |||
I-set | 2114..2202 | CDD:254352 | |||
IGc2 | 2129..2192 | CDD:197706 | |||
IG | 2214..2295 | CDD:214652 | |||
IGc2 | 2222..2287 | CDD:197706 | |||
I-set | 2307..2391 | CDD:254352 | |||
IGc2 | 2321..2381 | CDD:197706 | |||
I-set | 2400..2484 | CDD:254352 | 14/65 (22%) | ||
IGc2 | 2410..2474 | CDD:197706 | 12/55 (22%) | ||
IG_like | 2496..2576 | CDD:214653 | 25/94 (27%) | ||
IGc2 | 2507..2566 | CDD:197706 | 21/64 (33%) | ||
IG | 2589..2669 | CDD:214652 | 25/96 (26%) | ||
IGc2 | 2597..2659 | CDD:197706 | 20/76 (26%) | ||
IG | 2679..2760 | CDD:214652 | 25/85 (29%) | ||
IGc2 | 2687..2750 | CDD:197706 | 20/64 (31%) | ||
I-set | 2764..2851 | CDD:254352 | 24/91 (26%) | ||
Ig | 2770..2845 | CDD:299845 | 22/79 (28%) | ||
IG | 2863..2943 | CDD:214652 | 16/88 (18%) | ||
Ig | 2873..2942 | CDD:299845 | 14/77 (18%) | ||
IG_like | 2954..3032 | CDD:214653 | 12/84 (14%) | ||
IGc2 | 2963..3023 | CDD:197706 | 8/60 (13%) | ||
IG_like | 3046..3122 | CDD:214653 | 14/80 (18%) | ||
IGc2 | 3051..3113 | CDD:197706 | 12/65 (18%) | ||
IG_like | 3133..3214 | CDD:214653 | 15/103 (15%) | ||
Ig | 3144..3213 | CDD:299845 | 14/91 (15%) | ||
IG | 3224..3303 | CDD:214652 | 21/90 (23%) | ||
IGc2 | 3232..3293 | CDD:197706 | 16/67 (24%) | ||
IG_like | 3316..3394 | CDD:214653 | 10/77 (13%) | ||
IGc2 | 3321..3384 | CDD:197706 | 8/62 (13%) | ||
TSP1 | 3401..3452 | CDD:214559 | 9/58 (16%) | ||
G2F | 3455..3636 | CDD:284812 | 18/77 (23%) | ||
EGF_CA | 3691..3721 | CDD:214542 | |||
Furin-like | 3728..3857 | CDD:279142 | |||
EGF_CA | 3731..3774 | CDD:284955 | |||
EGF_CA | 3776..3814 | CDD:214542 | |||
EGF_CA | 3816..3849 | CDD:238011 | |||
EGF_CA | 3858..3899 | CDD:284955 | |||
EGF_CA | 3901..3940 | CDD:214542 | |||
EGF_CA | 4005..4044 | CDD:214542 | |||
EGF_CA | 4045..4085 | CDD:214542 | |||
side-VI | NP_001036705.1 | IG_like | 35..140 | CDD:214653 | 14/65 (22%) |
Ig_3 | 157..230 | CDD:290638 | 22/73 (30%) | ||
IG_like | 165..242 | CDD:214653 | 22/77 (29%) | ||
Ig | 265..343 | CDD:299845 | 21/79 (27%) | ||
IG_like | 267..343 | CDD:214653 | 21/77 (27%) | ||
IG_like | 363..440 | CDD:214653 | 23/77 (30%) | ||
IGc2 | 364..429 | CDD:197706 | 20/65 (31%) | ||
IG_like | 456..532 | CDD:214653 | 22/100 (22%) | ||
Ig_3 | 456..524 | CDD:290638 | 19/67 (28%) | ||
fn3 | 545..622 | CDD:278470 | 16/127 (13%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |