DRSC/TRiP Functional Genomics Resources

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Protein Alignment tfe3b and Mitf

DIOPT Version :9

Sequence 1:NP_001038531.1 Gene:tfe3b / 564996 ZFINID:ZDB-GENE-010919-3 Length:451 Species:Danio rerio
Sequence 2:NP_001245436.1 Gene:Mitf / 3885647 FlyBaseID:FBgn0263112 Length:837 Species:Drosophila melanogaster


Alignment Length:615 Identity:167/615 - (27%)
Similarity:227/615 - (36%) Gaps:253/615 - (41%)


- Green bases have known domain annotations that are detailed below.


Zfish     2 SSRVLLRQQLMREQAQEQERREAQQQASVAQLRP-------------------ADTTPAI---SV 44
            :||..|:.||.|||   |::...|||.....:.|                   :.:|.|.   |.
  Fly   177 TSRTQLKLQLQREQ---QQQMMIQQQTLDTAMDPKMHLLFGSGQGLMESEFIDSGSTSACGSGSS 238

Zfish    45 SLPPM---------------AARPPPAQ-----VPVEVLKVQTHLENPTKYHIQQAQRQQVKEYL 89
            ||..|               |....|.|     ||.:||:|.|.|||||:||:.|.|:.||::||
  Fly   239 SLEQMSQLVQMDNLIDSSSGAKLKVPLQSIGVDVPPQVLQVSTVLENPTRYHVIQKQKNQVRQYL 303

Zfish    90 STTL---------------GNKVATQTL------------------------------------- 102
            |.:.               .|..:|..|                                     
  Fly   304 SESFKPSMWGSHTSEIKLANNSASTGNLQNSSLQKGICDPLERTNRFGCDSAVSAKRIMPSDDAM 368

Zfish   103 -------------GVSPV--------PHSASAPE-------MGPS-------------------- 119
                         .::|:        .|.|..||       :|.|                    
  Fly   369 PISPFGGSFVRCDDINPIEPTVLRPNSHGAGEPENAHRTAQLGLSKANSSLSSTRSSSGIVNSIR 433

Zfish   120 ---------ASSAPNSPMAHLNLGSNKEEMDDVIDDIISLESSFNDDILSLIDSGLQLPNTLPGN 175
                     ::|||.||... ::.::..|.||:.|||:. ..|||.|  ...:|.|.:... |.|
  Fly   434 ISSTSSSLQSTSAPISPSVS-SVATSVSEPDDIFDDILQ-NDSFNFD--KNFNSELSIKQE-PQN 493

Zfish   176 LLDVYNSPGMTTPTITVSNSCPADLPNIKREYTGNVIVIETEARAFMKERQKKDNHNLIERRRRF 240
            |.|                                     .|..|..|:||||||||:|||||||
  Fly   494 LTD-------------------------------------AEMNALAKDRQKKDNHNMIERRRRF 521

Zfish   241 NINDRIKELGALIPKSTDP------EMRWNKGTILKASVDYIRKLQKEQQRAKEIEMRQKKLEQS 299
            ||||||||||.|:||.:|.      ::|.|||||||:|||||:.|:.|..|.::.|:||:::|..
  Fly   522 NINDRIKELGTLLPKGSDAFYEVVRDIRPNKGTILKSSVDYIKCLKHEVTRLRQNELRQRQVELQ 586

Zfish   300 NQALILRIQELEIQARHHG----------LNATVSP-----GLNTEASFIQNQLLQPNASMQAGV 349
            |:.|:.||:|||:||:.||          |:|...|     .|:..||..:..|.......:..|
  Fly   587 NRKLMSRIKELEMQAKSHGILLSENHLTSLSAPTQPYLKSFSLSPTASRSRRSLFDQPVEKKIQV 651

Zfish   350 GDGQPQSHLNMDGAMAQTSPSPFL---------------------SVPPSGSPAAVAVSGPLHLE 393
            .||       .||.|.......|:                     |.|.|.|...:. ||  ..|
  Fly   652 IDG-------ADGNMGMNQVDEFMEDCKYAVQGGDPMLSSHSHMQSAPQSPSSKTLN-SG--SFE 706

Zfish   394 TFSFTELDEHASDLYPDVGLSDILMDDVRG 423
            ..:|:|.||   .|:.  |.|.:..||..|
  Fly   707 PKNFSEADE---SLFR--GKSSLASDDCCG 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tfe3bNP_001038531.1 MITF_TFEB_C_3_N 4..144 CDD:292573 59/290 (20%)
HLH 224..284 CDD:238036 44/65 (68%)
DUF3371 312..450 CDD:288684 35/148 (24%)
MitfNP_001245436.1 MITF_TFEB_C_3_N <272..>311 CDD:292573 20/38 (53%)
HLH 505..570 CDD:238036 43/64 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593391
Domainoid 1 1.000 85 1.000 Domainoid score I8110
eggNOG 1 0.900 - - E1_KOG1318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 150 1.000 Inparanoid score I4340
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1211990at2759
OrthoFinder 1 1.000 - - FOG0000691
OrthoInspector 1 1.000 - - otm24979
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45776
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X566
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.860

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