Sequence 1: | XP_017212914.2 | Gene: | cacna1e / 564274 | -ID: | - | Length: | 2444 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
Alignment Length: | 2310 | Identity: | 522/2310 - (22%) |
---|---|---|---|
Similarity: | 895/2310 - (38%) | Gaps: | 728/2310 - (31%) |
- Green bases have known domain annotations that are detailed below.
Zfish 133 IEQRDIIKAHQAHKIQSTPQARRKEWEMARFGDDVPGLLGAGDGGSERSRNRDAPAVSTGGVSPA 197
Zfish 198 FKQTK--AQRARTMALYNPIPVRQNC--------------FTVNRSLFIFGEDNIVRKYAKKIIE 246
Zfish 247 WPPFEYMILATIIANCIVLALEQHLPGEDKTPMAKRLEKTEPYFIGMFCFEAGIKIIALGFVFHK 311
Zfish 312 GSYLRNGWNVMDFIVVSSGILATAGAHMNISL-DLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMK 375
Zfish 376 AMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHKQCEPVGK---------------DSERADS--- 422
Zfish 423 -PENE---FP-C----GSKLCPDHYNC-SGYWTGPNDGITQFDNILFSLLTVFQCITMEGWTTIL 477
Zfish 478 YYTNDALGSTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMK--LRRQQQ--- 537
Zfish 538 -----IERELNGY-RAWID--RAEEVMLAEE-------------------------NKNS----- 564
Zfish 565 ---GPSALDVLKR---------ATTIK---------------------------------RRGVD 584
Zfish 585 DARRAP--------EEQ---YADISSLGMPLNR-----------ASIRSAKRGPTSYFRR----- 622
Zfish 623 -----------------KERLLRISVRR------------------------------------- 633
Zfish 634 ----------MVKTQT-------------------------------FY---------------- 641
Zfish 642 --------------------------WTVLGL------------VALNTLCVAIVHHKQPQWLSS 668
Zfish 669 LLYYAEFLFLGLFLTEMFLKMYGLGPRLYFHSSFNCFDCGVIVGSIFEVFWGFFRPGTSFGISVL 733
Zfish 734 RALRLLRIFKITKYWASLRNLVVSLM-NSMKSIISLLFLLFLFIVVFALLGMQLFG-------GR 790
Zfish 791 FIFDEYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSVY---------FIV 846
Zfish 847 LTLFGNYTLLNVFLAIAVDNLA----NAQELTKDEEEEEEAFNQKHALQKAKEVGPMSSFMSSER 907
Zfish 908 RRRPYLYRKRAIH------RSRAAYSFEDAESLADARPFNASNSFMSRRERRRRLTMSVWEQRTS 966
Zfish 967 QLR--------RHRQMSSREILFSSPSEEQDGPPGCPLHRKPGLSPSGSKRRATETTSTTIMPEG 1023
Zfish 1024 TLEPPMPMDMPVDEQALPISIPEPPLAIPIPEPPMPVDACLPEPPVTLNLPLTEPSESKTSPEGA 1088
Zfish 1089 LDINNHCPRLNGNRRQRAVRKHRPPAMGDMLTPDMGPRPRRPRHRELHTDPRGK-ETLQGDGVDG 1152
Zfish 1153 KEQKPGSEGDEKSDGEISPDGRGLEQRQNKPDNTESSTESKPANSPRKIPPLDSEPATLQLTDNT 1217
Zfish 1218 LQQSSQGTTCAGETDNNNHGSLNQDKSSLNTSIVIEVTDTQPSMELTSITGNSKDVEASKPEKEE 1282
Zfish 1283 ETPDAPKGPPPVSMFIFKP------NNP-------VRRACHYVVNLRYFEMSILLVIAASSIALA 1334
Zfish 1335 AED------PVNTNSDRNKVLRYFDYVFTGVFTFEMIIKMIDQGLVLHYGSYFRDPWNILDFIVV 1393
Zfish 1394 VGALVAFALTNVMGSNTGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIV 1458
Zfish 1459 YKLFMFIFAVIAVQLFKGKFYYCTDSSK--------DTENECKGYYIDYDKDKKKEKREWKRRDF 1515
Zfish 1516 HYDNVVWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSQGNRMEMSIFYVIYFVVFPFFFVNIF 1580
Zfish 1581 VALIIITFQEQGDK--------MMEECSLEKNERACIDFAISAKPLTRYMPQNRQTLQYRLWQFV 1637
Zfish 1638 VSPSFEYTVLTMIALNTIVLMMKHHDPRLEGYDDVLKYLNTIFTVIFSVECVLKILAFGIMNYFR 1702
Zfish 1703 DTWNIFD----FITVLGSITEILVDKFQTGKTFNMGFLKLFRAARLIKLLRQGYTIRILLWTFVQ 1763
Zfish 1764 SFKALPYVCLLIAMLFFIYAIIGMQVFGNIKINEKTQINEHNNFRTFFGALMLLFRSATGESWQE 1828
Zfish 1829 IMLSCLGEKECEIDTSVNSTTKTIKNDCGT-DFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLT 1892
Zfish 1893 RD-SSILGPHHLDEFVRIWGEYDRAACGKLHYKEMYKVVRTISPPLGFGKNCPYRVACKRLVLMN 1956
Zfish 1957 MPVDEDMSVHFTSTLMALIRTALDIKIARG---------GEDRGQMDVELQKEI-SVIWPHLSQK 2011
Zfish 2012 SLDLLVPIHKASDMTIGKIYAAMMIMDYYKQNKAK 2046 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cacna1e | XP_017212914.2 | Ion_trans | 247..524 | CDD:306908 | 93/305 (30%) |
Ion_trans | 640..875 | CDD:306908 | 80/309 (26%) | ||
Atrophin-1 | 887..>1210 | CDD:331285 | 45/337 (13%) | ||
Ion_trans | 1316..1549 | CDD:306908 | 78/246 (32%) | ||
Ion_trans | 1639..1896 | CDD:306908 | 82/262 (31%) | ||
GPHH | 1897..1967 | CDD:318993 | 13/69 (19%) | ||
Ca_chan_IQ | 1969..2043 | CDD:312334 | 14/83 (17%) | ||
Transformer | 2203..2368 | CDD:253769 | |||
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 88/288 (31%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 19/132 (14%) | ||
Ion_trans | 835..1028 | CDD:278921 | 66/213 (31%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 65/464 (14%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 86/276 (31%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 14/55 (25%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 78/243 (32%) | ||
GPHH | 1880..1930 | CDD:293510 | 11/54 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |