DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpb2 and CG32379

DIOPT Version :9

Sequence 1:NP_062749.2 Gene:Cpb2 / 56373 MGIID:1891837 Length:422 Species:Mus musculus
Sequence 2:NP_729252.2 Gene:CG32379 / 326211 FlyBaseID:FBgn0052379 Length:344 Species:Drosophila melanogaster


Alignment Length:348 Identity:102/348 - (29%)
Similarity:167/348 - (47%) Gaps:28/348 - (8%)


- Green bases have known domain annotations that are detailed below.


Mouse    88 IPFNVLMNNVEDLIEQQTFN-------------DTVSPRASASYYEQYHSLNEIYSWIEVITEQH 139
            :.:.||:.::..|:..|...             |.:|         .:::.:||..:::.:.|:.
  Fly     6 LEYKVLIEDLAPLVHAQRAENLRKKLLIQWPHIDVLS---------AFYTHSEINDYLDSLLERF 61

Mouse   140 PDMLQKIYIGSSFEKYPLYVLKV-SGKEQRIKNAIWIDCGIHAREWISPAFCLWFIGYVTQFHGK 203
            |..:|....|.|:|:.||.||.: :|..:|.|..|.||..:||||||||:..|:.|..:...:|.
  Fly    62 PKRVQVKQFGWSYERRPLKVLTITNGDGRRNKPVILIDGTVHAREWISPSMALYIIQQLLDNYGD 126

Mouse   204 ENLYTRLLRHVDFYIMPVMNVDGYDYTWKKNRMWRKNRSAHKNNRCVGTDLNRNFASKHWCEKGA 268
            ..   .||:..|:.||||:|.|||:||...:|.|||:|....|..|:|||:||||..:...::|:
  Fly   127 NQ---ELLQDYDWVIMPVVNADGYEYTHTDSRYWRKSRRPTSNPECIGTDINRNFGYEWGHDEGS 188

Mouse   269 SSSSCSETYCGLYPESEPEVKAVADFLRRNIDHIKAYISMHSYSQQILFPYSYNRSKSKDHEELS 333
            ||..|...|.|..|..:.|.:.:.|.:......:..|:|:|||....|.|:.|.......::::.
  Fly   189 SSDPCENIYRGERPFDQSESQVLRDVMLHYKGRLNFYLSLHSYGNYFLLPWGYTSDFPDTYQDMM 253

Mouse   334 LVASEAVRAIESINKNTRYTHGSGSESLYLAPGGSDDWIYD-LGIKYSFTIELRDTGRYGFLLPE 397
            .||....:|| ..:.|..|::||....||...|.:.|:.:. :....:.|:||...|..||....
  Fly   254 SVADAGAKAI-IYSTNGIYSYGSTYYVLYPTSGDTTDFAFGVVNATVAMTMELPAAGFQGFDPWI 317

Mouse   398 RYIKPTCAEALAAISKIVWHVIR 420
            ..|:....|:...:..:...|||
  Fly   318 SQIERLVTESWVGVRAMAAEVIR 340

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity