Sequence 1: | XP_691671.2 | Gene: | vps41 / 563215 | ZFINID: | ZDB-GENE-030131-6671 | Length: | 854 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036415.2 | Gene: | lt / 3355130 | FlyBaseID: | FBgn0002566 | Length: | 841 | Species: | Drosophila melanogaster |
Alignment Length: | 849 | Identity: | 325/849 - (38%) |
---|---|---|---|
Similarity: | 495/849 - (58%) | Gaps: | 56/849 - (6%) |
- Green bases have known domain annotations that are detailed below.
Zfish 17 DESEEEDTEEEPKLKYERLTNGVTEILQKDAASCMTVHDKFLALGTHFGKVFLLDIQGN-VTQKF 80
Zfish 81 EIS-----SVKINQISLDESGDHVGICSEDGKVQVFGLYTREGFHE-NFDCPIKVVALHPQFSKS 139
Zfish 140 NNKQFVTGGNKLLLYERNWLNRWKTSVLHEGEGNITSVKWRGNLIAWANNVGVKIYDIGSK---- 200
Zfish 201 ---------QRITNVLRDNTSLRPDMYPCSLCWKDNTTLIIGWGCSVKICAVKERDPTEMR--DL 254
Zfish 255 PSRYVEIVSAFETEFFISGLAPL-ADQLVTLYYVKENSDHMEEEFRTRPRLDIIQPLPEGCEEIS 318
Zfish 319 SDALTVRNFQENQCRDYRLEHSEGESLFYIISPKDIVVAKERDQDDHIDWLLEKKKYEEALMAAE 383
Zfish 384 ISFKNIKRHDVQKIGMAYINHLVEKGDYDTAARKCQKVLGKNMDLWENEVYRFKTIGQLKAISQY 448
Zfish 449 LPRGD-LRLRPAIYEMILHDFLKTDYEGFATLIREWPGELYNNMAIVQAVNEHLKKDPTNSILLT 512
Zfish 513 TLAELYTYDQRYDRALEIYLRLRHKDVYQLIHKHNLFSSIKDKIVLLMDFDKEKAVDMLLDNEDK 577
Zfish 578 ISMDKVVEELKDRPELLHVYLHKLFKRDHHKGQKYHERQISLYAEFDRPNLLPFLRESMHCPLEK 642
Zfish 643 ALEICQQRHFVEETVFLLSRMG--NCRRALQMIMEELANVDKAIEFAKEQDDRELWEDLISYSID 705
Zfish 706 KPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILHDYNLQILLREGCKKILVADSLS 770
Zfish 771 LLQRMHRTQKKGVRVDEENICESCHTPILPSDTAQAFGVVVFHCRHMFHKECLPSPGSIPGIQYC 835
Zfish 836 NICS 839 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
vps41 | XP_691671.2 | WD40 | <44..215 | CDD:225201 | 71/190 (37%) |
WD40 repeat | 82..131 | CDD:293791 | 20/54 (37%) | ||
WD40 repeat | 137..169 | CDD:293791 | 16/31 (52%) | ||
WD40 repeat | 174..210 | CDD:293791 | 14/48 (29%) | ||
TPR | 328..589 | CDD:223533 | 107/261 (41%) | ||
CLH | 571..708 | CDD:128594 | 56/138 (41%) | ||
Clathrin | 575..710 | CDD:279031 | 54/136 (40%) | ||
Vps39_2 | 713..814 | CDD:287353 | 32/100 (32%) | ||
lt | NP_001036415.2 | WD40 repeat | 33..81 | CDD:293791 | 18/47 (38%) |
WD40 | <42..204 | CDD:295369 | 69/162 (43%) | ||
WD40 repeat | 90..123 | CDD:293791 | 13/32 (41%) | ||
WD40 repeat | 130..168 | CDD:293791 | 21/38 (55%) | ||
CLH | 570..707 | CDD:128594 | 56/139 (40%) | ||
Clathrin | 580..708 | CDD:279031 | 52/129 (40%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170596143 | |
Domainoid | 1 | 1.000 | 396 | 1.000 | Domainoid score | I722 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H69165 | |
Inparanoid | 1 | 1.050 | 563 | 1.000 | Inparanoid score | I1045 |
OMA | 1 | 1.010 | - | - | QHG54432 | |
OrthoDB | 1 | 1.010 | - | - | D103854at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004492 | |
OrthoInspector | 1 | 1.000 | - | - | oto40530 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103391 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12616 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X3779 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.910 |