DRSC/TRiP Functional Genomics Resources

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Protein Alignment AZGP1 and syg-2

DIOPT Version :9

Sequence 1:NP_001176.1 Gene:AZGP1 / 563 HGNCID:910 Length:298 Species:Homo sapiens
Sequence 2:NP_001309674.1 Gene:syg-2 / 181561 WormBaseID:WBGene00007750 Length:1230 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AZGP1NP_001176.1 MHC_I 26..201 CDD:278555
IgC_MHC_I_alpha3 205..296 CDD:143322
syg-2NP_001309674.1 IG_like 25..105 CDD:214653
Ig 33..122 CDD:299845
Ig 147..228 CDD:299845
IGc2 248..313 CDD:197706
Ig 450..537 CDD:299845
Ig 559..632 CDD:299845
I-set 657..738 CDD:254352
Ig 665..738 CDD:299845
IG_like 748..828 CDD:214653
IGc2 756..817 CDD:197706
Ig 845..922 CDD:299845
FN3 934..1023 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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