Sequence 1: | XP_021324711.1 | Gene: | cacna1bb / 562796 | ZFINID: | ZDB-GENE-090514-4 | Length: | 2345 | Species: | Danio rerio |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001259619.1 | Gene: | para / 32619 | FlyBaseID: | FBgn0285944 | Length: | 2145 | Species: | Drosophila melanogaster |
Alignment Length: | 2064 | Identity: | 502/2064 - (24%) |
---|---|---|---|
Similarity: | 846/2064 - (40%) | Gaps: | 590/2064 - (28%) |
- Green bases have known domain annotations that are detailed below.
Zfish 62 FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYLILTTIIANCIVLALEQHLPALDKTPMSERLDDT 126
Zfish 127 EPYFIGIFCFEAGIKIIALGFVFHKDSYLRNGWNIMDFVVVVTGILTTVGSQFDLRTLRAVRVLR 191
Zfish 192 PLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGVEFYMGKFHFTC---FKVD--- 250
Zfish 251 -------------------TGEKAVDYP-CGAEPPSRSCPVGTNCTE-YWKGPNFGITNFDNILF 294
Zfish 295 AILTVFQCITMEGWTDVLYHTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLS---GEFAKERE 356
Zfish 357 RVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLA-----EEDQNAEEKSPLDGAWYRRKQNN 416
Zfish 417 PVLKRTKS------------RKGRND-------LISAEEGDEHFTDI------------------ 444
Zfish 445 --SSVAPPGSPF--ARASLKSSK-----------------------------------NDS---- 466
Zfish 467 ----------------------SSYFRR-------------------------KEKRIRFFIRRM 484
Zfish 485 VKAQS------------------------------------------------------------ 489
Zfish 490 ---------------------FY------------------------------------------ 491
Zfish 492 W-------------IVLCLVGLNTMCVAIVHYDQPEWLTKALYLAEFVFLGLFLTEMTLKMYGLG 543
Zfish 544 PRNYFHSSFNCFDFGVIVGSIFEVIWAAIQPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSL 608
Zfish 609 L-NSMKSIISLLFLLFLFIVVFALLGMQLFGGQFN-----FED-ETPTTNFDSFPAAIMTVFQIL 666
Zfish 667 TGEDWNAVMYHGIESQGGVR--GGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANA--QELTKD 727
Zfish 728 EEQQEEAAKKSLALQKAMEVKEVSPMSAANISIAAFVKQNRDAISRRSSVCSVHSPKEQQRSLQK 792
Zfish 793 LSIWEQRTNQLRRHNLRSSSEALYNELEPEERLRVSSALHLRPDMKTHHDRPLVVEHRDSVDNLR 857
Zfish 858 SDKDGDTSEGQPASNHQRKYHKCRGENGDTGEGRLHRHHSQNRENQGG-LERSNSQDGGQRNHHR 921
Zfish 922 SSGSPEEGIGIEEREHRHHHSRRPREVNGNGNGVIGNGGRGERIRGHREGEGGNGERRRHRPRVK 986
Zfish 987 AQSTLDGDECRENGGKRRSRPTETDSLTTSPLQSPSEEKPEDKDNLKNSTRVGPSGVNIPVTITA 1051
Zfish 1052 PPGETTVIPMNNIDGDSLLLNEEKKDLDELNQNAPKHILPYS-------------SMFVFGPTNP 1103
Zfish 1104 VRRLCHYVVNLRYFEMCILTVITMSSIALAAEDPVQAHAPR----NDVLKYLDYVFTGVFTFEMV 1164
Zfish 1165 IKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSSFMGSQQSVTRGTKGKDINTIKSLRVL 1229
Zfish 1230 RVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFHCTDESKAL 1294
Zfish 1295 EKDCRGQFLEY---GSDGVAMTQPREWKKYDFHYDNVLWAFLTLFTVSTGEGWPLVLKHSVDATY 1356
Zfish 1357 EDQGPSPGYRMETSIF---YVVYFIVF-PFFFVNIFVALIIITFQEQGDKAMSECSL-----EKN 1412
Zfish 1413 ERACIDFAINAKPLTRYMPQDKNSYQYKMWKFVVSTPFEYSILTMIAINTVVLMMKFHGAPKPYE 1477
Zfish 1478 DMLKWLNIIFTALFTLECVLKVIAFGPLNYLKEAWNIFDFVTVLGSITDILVTEIKTDKRINLSF 1542
Zfish 1543 LRLFRAA---RLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALNN 1604
Zfish 1605 EDSAINIHNNFRTFFQALMLLFRSATGEAWHEIMLACLSERYC---DIESGYSGKECGS-DFAYF 1665
Zfish 1666 YFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASI-LGPHHLDEFIRVWAEYDPAACGRMSYLDMY 1729
Zfish 1730 EMLRHMSPPLGLGKKCPPRIAYKRLVRMNMPIAEDNTVHFTSTLMALIR 1778 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cacna1bb | XP_021324711.1 | Ion_trans | 87..359 | CDD:306908 | 89/301 (30%) |
Ion_trans | 487..726 | CDD:306908 | 86/385 (22%) | ||
Ion_trans | 1115..1404 | CDD:306908 | 102/299 (34%) | ||
Ion_trans | 1447..1698 | CDD:306908 | 83/257 (32%) | ||
GPHH | 1699..1769 | CDD:318993 | 18/70 (26%) | ||
Ca_chan_IQ | 1771..1845 | CDD:312334 | 3/8 (38%) | ||
Transformer | <2074..>2135 | CDD:253769 | |||
THRAP3_BCLAF1 | 2109..>2285 | CDD:317794 | |||
para | NP_001259619.1 | Ion_trans | 165..436 | CDD:278921 | 81/281 (29%) |
Na_trans_cytopl | 515..648 | CDD:288761 | 19/132 (14%) | ||
Ion_trans | 835..1028 | CDD:278921 | 67/206 (33%) | ||
Na_trans_assoc | 1054..1296 | CDD:284034 | 65/396 (16%) | ||
Ion_trans | 1318..1571 | CDD:278921 | 93/282 (33%) | ||
Na_channel_gate | 1561..1613 | CDD:240441 | 11/52 (21%) | ||
Ion_trans | 1636..1871 | CDD:278921 | 79/239 (33%) | ||
GPHH | 1880..1930 | CDD:293510 | 15/54 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |