DRSC/TRiP Functional Genomics Resources

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Protein Alignment kcng2 and Shawl

DIOPT Version :9

Sequence 1:XP_690900.2 Gene:kcng2 / 562421 ZFINID:ZDB-GENE-100701-1 Length:546 Species:Danio rerio
Sequence 2:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster


Alignment Length:608 Identity:156/608 - (25%)
Similarity:247/608 - (40%) Gaps:172/608 - (28%)


- Green bases have known domain annotations that are detailed below.


Zfish    73 IINVGGIRYRIPWSTLEEFPLTRLGRLHNCNNAEEILDLCDDYDARCNEFFFDRSPSAFRSIVTF 137
            |:||.||||....:||::.|.|||.||         .:...:||...||:||||.|..|..|:.:
  Fly     8 ILNVSGIRYETYKATLKKIPATRLSRL---------TEALANYDPVLNEYFFDRHPGVFTQILNY 63

Zfish   138 LAAGKLRLLREMCALSFQEELSYWGVEEASLEWCCLRKLRLRQEEQR-----ERLRLEEE---EA 194
            ...|||....::|...|:|||.:||::...:|.||.....:.::.|.     ::|.:|.|   |.
  Fly    64 YRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIENEKPTEE 128

Zfish   195 ELTSPHSCEEAPAVGSPEEGRLSGCMHSLRD----MVENPHSGIPGKIFACLSVVFVAITAVTLC 255
            ::......|||.:     .|.|: |...::.    |.:.|.|....||.|.:||.|:.::.::.|
  Fly   129 QIARLFGFEEALS-----NGELN-CWQRIKPKIWAMFDEPSSSTGAKIVAGMSVFFIFVSVISFC 187

Zfish   256 VSTMPDLR--------------------------------------------------------- 263
            :.|.|..|                                                         
  Fly   188 LKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSIGPTFRVTNYTS 252

Zfish   264 ---------------------------------------EEEERGECSQRCYN-----------I 278
                                                   ||:..|...:|.:.           .
  Fly   253 YSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGWIETYGQPHEAF 317

Zfish   279 FVLETVCVGWFSLEFLLRFIQTQSKCTFLRTPLNIIDVVAILPYYITLIVDSMSVGDRPAGSGNN 343
            |.:|.||..||.:|.::|.|.:.:...|:::|:||||..|.|.:| |.::..|.           
  Fly   318 FYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFY-TDVMQRMG----------- 370

Zfish   344 YLEKVGLV--LRVLRALRIFYVMRLARHSLGLQTLGLTVRRCTREFGLLLLFLCVAMALFSPLVF 406
              |..||:  ..::|.:|:|   :|.|||.||:.|..|.:...:|..||:.||.:.:..|:.|.:
  Fly   371 --EYTGLLEAFSIVRIMRLF---KLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASLAY 430

Zfish   407 LAES-ELGAKQEFTSIPGSYWWAVISMTTVGYGDMVPRSIPGQVVALSSILSGILLMAFPVT--- 467
            .||. :.....:|.|||...|||:::||||||||:.|::.||..|.....|:|:|.:|.||.   
  Fly   431 YAEKLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPVIV 495

Zfish   468 ---SIF--HTFSRSYLELKE------EQNRATRHKPDSQDSTKSQNSEDSQDTDSSI--HGITET 519
               |:|  ||.:||.|..|.      ||.|..| :|.:....::...:.:..|...:  .|:...
  Fly   496 SNFSMFYSHTQARSKLPKKRRRVLPVEQPRRKR-EPTAPHRGRTNAIKQTPPTGPGLVAGGVVPV 559

Zfish   520 TAVS-ALHRRSVAVASQGAPQLR 541
            .|.. .|...:|..::.|||..:
  Fly   560 GAGGPGLGGHAVGHSAAGAPMFK 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kcng2XP_690900.2 BTB 72..172 CDD:197585 37/98 (38%)
BTB_2 73..171 CDD:280393 37/97 (38%)
Ion_trans 273..481 CDD:278921 76/229 (33%)
Ion_trans_2 <416..475 CDD:285168 29/66 (44%)
ShawlNP_001097131.2 BTB 7..99 CDD:197585 38/99 (38%)
BTB_2 7..97 CDD:280393 37/97 (38%)
Ion_trans 307..506 CDD:278921 71/215 (33%)
Ion_trans_2 <449..499 CDD:285168 21/49 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.900

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