DRSC/TRiP Functional Genomics Resources

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Protein Alignment si:ch211-207l14.1 and sel-11

DIOPT Version :10

Sequence 1:XP_690894.4 Gene:si:ch211-207l14.1 / 562414 ZFINID:ZDB-GENE-120215-234 Length:221 Species:Danio rerio
Sequence 2:NP_505969.1 Gene:sel-11 / 179612 WormBaseID:WBGene00004768 Length:610 Species:Caenorhabditis elegans


Alignment Length:59 Identity:21/59 - (35%)
Similarity:32/59 - (54%) Gaps:4/59 - (6%)


- Green bases have known domain annotations that are detailed below.


Zfish   150 VMSMSD---ADSLCLICHDDLRKGGGVIRELHCSHSFHSECIEEWLWTKQTCPTCHKHV 205
            |:|..|   .|:.|:||.:::...... :.|.|||.||:.|:..|...:||||||...:
 Worm   279 VVSAEDLAAMDATCIICREEMTVDASP-KRLPCSHVFHAHCLRSWFQRQQTCPTCRTDI 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
si:ch211-207l14.1XP_690894.4 LNP1 53..181 CDD:464709 9/33 (27%)
RING_Ubox 159..205 CDD:473075 17/45 (38%)
sel-11NP_505969.1 HRD1 51..>333 CDD:227568 20/54 (37%)

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