DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SUSD2 and susd2

DIOPT Version :10

Sequence 1:NP_062547.1 Gene:SUSD2 / 56241 HGNCID:30667 Length:822 Species:Homo sapiens
Sequence 2:XP_031748710.1 Gene:susd2 / 105946288 XenbaseID:XB-GENE-5887491 Length:1591 Species:Xenopus tropicalis


Alignment Length:801 Identity:428/801 - (53%)
Similarity:547/801 - (68%) Gaps:33/801 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     3 PALLPWALLLLATALGPGPGPTADAQESCSMRCGALDGPCSCHPTCSGLGTCCLDFRDFCLEILP 67
            ||||...:.||...|   |...:.|.||||.:||.....||||.||..|.|||.|:..||:.|.|
 Frog     2 PALLLICIGLLTLTL---PPEVSGASESCSSQCGERLQSCSCHTTCQKLQTCCTDYHQFCISISP 63

Human    68 YSGSMMGGKDFVVRHFKMSSPTDASVICRFKDSIQTLGHVDSSGQVHCVSPLLYESGRIPFTVSL 132
            :||::||||||::.:...|  .::::||||.:...|.|:||::|..||:||||.|:|||..|||.
 Frog    64 HSGTLMGGKDFIILNLTFS--PNSTIICRFNNETNTEGYVDAAGIAHCISPLLLETGRISLTVSQ 126

Human   133 DNGHSFPRAGTWLAVHPNKVSMMEKSELVNETRWQYYGTANTSGNLSLTWHVKSLPTQTITIELW 197
            |.||:|.|:|||||||.:|.|:.|||..::..:||||||...:|.|||.|:.|:||::.|:||:|
 Frog   127 DGGHNFTRSGTWLAVHHSKASVAEKSVQLDSKKWQYYGTPGYNGTLSLIWNAKTLPSENISIEVW 191

Human   198 GYEETGMPYSQEWTAKWSYLYPLATHIPNSGSFTFTPKPAPPSYQRWRVGALRIIDSKNYAGQKD 262
            ||.|||.|||..|.|.|.|||.||...||||:|||||.||...|.:|.||.||||.|....||.:
 Frog   192 GYSETGTPYSDTWRADWKYLYTLAPTYPNSGTFTFTPSPAEAPYNQWDVGMLRIIPSDKPHGQMN 256

Human   263 VQALWTNDHALAWHLSDDFREDPVAWARTQCQAWEELE-DQLPNFLEELPDCPCTLTQARADSGR 326
            |.|:|:..|||||||.:.||.|..|||..:|.:|.:.| :.|||||:|.|||||||.|||||:||
 Frog   257 VHAIWSPVHALAWHLEESFRNDSAAWASDKCISWRDAEINALPNFLKETPDCPCTLDQARADTGR 321

Human   327 FFTDYGCDMEQGSVCTYHPGAVHCVRSVQASLRYGSGQQCCYTADGTQLLTADSSGGSTPDRGHD 391
            :.||||||:|:||||||||||||||||:|||.:|.|||||||.:.|.|:||.||:||||||||||
 Frog   322 YHTDYGCDIEKGSVCTYHPGAVHCVRSIQASPQYASGQQCCYDSTGAQVLTFDSTGGSTPDRGHD 386

Human   392 WGAPPFRTPPRVPSMSHWLYDVLSFYYCCLWAPDCPRYMQRRPSNDCRNYRPPRLASAFGDPHFV 456
            ||:||:|.|||||..|||:|||::|||||||:.:|..||..|||:|||.|:||:.||.|||||||
 Frog   387 WGSPPYRKPPRVPGFSHWMYDVVTFYYCCLWSDNCQYYMDLRPSSDCRTYKPPKAASGFGDPHFV 451

Human   457 TFDGTNFTFNGRGEYVLLEAALTDLRVQAR------AQPGTMSNG--------------TETRGT 501
            ||||:.:||||:|||.|:.::...|.:|||      .:|.|.:.|              :|....
 Frog   452 TFDGSKYTFNGKGEYTLVSSSHKSLSIQARTKAFTVTKPDTGNFGQINAEIHFDDRADRSEVHAA 516

Human   502 GLTAVAVQEGNSDVVEVRLANRTG-GLEVLLNQEVLSFTEQSWMDLKGMFLSVAAGDRVSIMLAS 565
            ||.:||:||.:|||:|||:.:.:. .||.||||||:||.|||||||.|:|:..|....|::|..|
 Frog   517 GLCSVAMQEDDSDVIEVRVKDGSSHELETLLNQEVISFEEQSWMDLVGVFVYSAISSNVTVMFPS 581

Human   566 GAGLEVSVQGPFLSVSVLLPEKFLTHTHGLLGTLNNDPTDDFTLHSGRVLPPGTSPQELFLFGAN 630
            |||:||..:..||||:||||:.|:..|.||||.:||:|.||||..:|..|||..:|.|||..||:
 Frog   582 GAGIEVRRREDFLSVNVLLPDDFMNQTQGLLGVMNNNPADDFTFRNGTSLPPNATPVELFQLGAD 646

Human   631 WTVHNASSLLTYDSWFLVHNFLYQPKHDPTFEPLFPSETTLNPSLAQEAAKLCGDDHFCNFDVAA 695
            |.|.|.|||.||||..|::|  ...|||.||:|.|..|.  |||  :...:|||||.||.||..|
 Frog   647 WAVTNESSLFTYDSQELINN--SHVKHDHTFQPTFSFEE--NPS--EPLLELCGDDEFCRFDGLA 705

Human   696 TGSLSTGTATRVAHQLHQRRMQSLQPVVSCGWLAPPPNGQKEGNRYLAGSTIYFHCDNGYSLAGA 760
            |..|:...||:::..:|...:::|:|.|||||:|||.||:|.|..|||||.:.|.|:.|:.:.|.
 Frog   706 TYDLNVANATKISFLVHSNLVKNLKPEVSCGWIAPPENGEKIGTTYLAGSVVQFKCNAGFIMNGT 770

Human   761 ETSTCQADGTWSSPTPKCQPG 781
            :..||..|||||....:|..|
 Frog   771 KLRTCLPDGTWSGDAAQCLVG 791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SUSD2NP_062547.1 Somatomedin_B 29..64 CDD:460034 19/34 (56%)
AMOP 289..429 CDD:461048 98/140 (70%)
VWD 448..613 CDD:459671 89/185 (48%)
CCP 725..779 CDD:153056 26/53 (49%)
susd2XP_031748710.1 Somatomedin_B 25..58 CDD:460034 17/32 (53%)
AMOP 283..424 CDD:461048 98/140 (70%)
VWD 443..629 CDD:459671 89/185 (48%)
CCP 735..788 CDD:153056 26/52 (50%)
Somatomedin_B 794..827 CDD:460034
AMOP 1052..1192 CDD:461048
VWD 1200..1374 CDD:214566
CCP 1487..1541 CDD:153056
Blue background indicates that the domain is not in the aligned region.

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